Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC15.9■□□□□ 0.14
TRIM43Q96BQ3 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.9■□□□□ 0.14
TRIM43Q96BQ3 AC124068.2-201ENST00000569473 1109 ntBASIC15.9■□□□□ 0.14
TRIM43Q96BQ3 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC15.9■□□□□ 0.14
TRIM43Q96BQ3 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
TRIM43Q96BQ3 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC15.9■□□□□ 0.14
TRIM43Q96BQ3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.9■□□□□ 0.14
TRIM43Q96BQ3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.9■□□□□ 0.14
TRIM43Q96BQ3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
TRIM43Q96BQ3 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM43Q96BQ3 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM43Q96BQ3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM43Q96BQ3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.9■□□□□ 0.14
TRIM43Q96BQ3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM43Q96BQ3 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM43Q96BQ3 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 AC099398.1-201ENST00000567919 2776 ntBASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 NME4-203ENST00000397722 1232 ntTSL 2 BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 RNA5SP406-201ENST00000516106 112 ntBASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 AC010632.2-201ENST00000588369 1224 ntBASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TRIM43Q96BQ3 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 AL590440.2-201ENST00000641973 1595 ntBASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 AC009093.10-201ENST00000641956 1442 ntBASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 OR8T1P-201ENST00000421347 918 ntBASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 ST13P19-201ENST00000442505 1124 ntBASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 GNG10P1-201ENST00000452289 199 ntBASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 RN7SL23P-201ENST00000484055 275 ntBASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms