Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 AL139400.1-201ENST00000366220 510 ntBASIC14.41□□□□□ -0.1
VPS33AQ96AX1 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 AC125807.1-201ENST00000483097 614 ntBASIC14.41□□□□□ -0.1
VPS33AQ96AX1 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 AL844908.2-201ENST00000609461 460 ntBASIC14.41□□□□□ -0.1
VPS33AQ96AX1 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 AC012617.1-204ENST00000586340 2305 ntBASIC14.41□□□□□ -0.1
VPS33AQ96AX1 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 AC087499.5-201ENST00000452760 1342 ntBASIC14.41□□□□□ -0.1
VPS33AQ96AX1 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 CLK3P2-201ENST00000427566 1453 ntBASIC14.4□□□□□ -0.1
VPS33AQ96AX1 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 AL596442.2-201ENST00000610240 980 ntBASIC14.4□□□□□ -0.1
VPS33AQ96AX1 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS33AQ96AX1 AC093525.8-201ENST00000624099 1342 ntBASIC14.4□□□□□ -0.1
VPS33AQ96AX1 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.11
VPS33AQ96AX1 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms