Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 MIR6074-201ENST00000612054 107 ntBASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 AC079781.5-202ENST00000641784 3743 ntBASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 CICP17-201ENST00000418553 2377 ntBASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 AC007969.1-201ENST00000433675 447 ntBASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 BRI3BPP1-201ENST00000594224 787 ntBASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 AL355385.1-201ENST00000606123 409 ntBASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 AL603764.1-201ENST00000636452 321 ntBASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 ST20-AS1-201ENST00000560255 4223 ntBASIC14.97□□□□□ -0.01
SLC44A1Q8WWI5 AC215219.1-201ENST00000400706 1817 ntBASIC14.96□□□□□ -0.01
SLC44A1Q8WWI5 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
SLC44A1Q8WWI5 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.96□□□□□ -0.01
SLC44A1Q8WWI5 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.96□□□□□ -0.01
SLC44A1Q8WWI5 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SLC44A1Q8WWI5 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
SLC44A1Q8WWI5 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SLC44A1Q8WWI5 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.96□□□□□ -0.01
SLC44A1Q8WWI5 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC44A1Q8WWI5 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC44A1Q8WWI5 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SLC44A1Q8WWI5 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC44A1Q8WWI5 RNU1-114P-201ENST00000365297 166 ntBASIC14.96□□□□□ -0.01
SLC44A1Q8WWI5 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.96□□□□□ -0.01
SLC44A1Q8WWI5 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
SLC44A1Q8WWI5 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
SLC44A1Q8WWI5 FAM86GP-201ENST00000448322 971 ntBASIC14.96□□□□□ -0.01
SLC44A1Q8WWI5 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.96□□□□□ -0.01
SLC44A1Q8WWI5 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.96□□□□□ -0.01
SLC44A1Q8WWI5 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.96□□□□□ -0.01
SLC44A1Q8WWI5 SPDYE22P-201ENST00000582158 798 ntBASIC14.96□□□□□ -0.01
SLC44A1Q8WWI5 AC004790.1-201ENST00000612686 536 ntBASIC14.96□□□□□ -0.01
SLC44A1Q8WWI5 AC007431.3-201ENST00000623221 587 ntBASIC14.96□□□□□ -0.01
SLC44A1Q8WWI5 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC44A1Q8WWI5 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC44A1Q8WWI5 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.96□□□□□ -0.01
SLC44A1Q8WWI5 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.96□□□□□ -0.01
SLC44A1Q8WWI5 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SLC44A1Q8WWI5 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SLC44A1Q8WWI5 AL136172.1-201ENST00000598590 1394 ntBASIC14.96□□□□□ -0.02
SLC44A1Q8WWI5 AC105206.1-202ENST00000314927 2368 ntBASIC14.96□□□□□ -0.02
SLC44A1Q8WWI5 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SLC44A1Q8WWI5 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
SLC44A1Q8WWI5 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC44A1Q8WWI5 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms