Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 RPS19-201ENST00000221975 500 ntTSL 3 BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 KRT18P2-201ENST00000447938 1258 ntBASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 PPIE-208ENST00000470213 927 ntTSL 3 BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 SLC25A39P2-201ENST00000537614 270 ntBASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 LITAF-211ENST00000572255 516 ntTSL 4 BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
SMIM4Q8WVI0 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
SMIM4Q8WVI0 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SMIM4Q8WVI0 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SMIM4Q8WVI0 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
SMIM4Q8WVI0 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
SMIM4Q8WVI0 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SMIM4Q8WVI0 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SMIM4Q8WVI0 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.77□□□□□ -0.36
SMIM4Q8WVI0 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SMIM4Q8WVI0 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.77□□□□□ -0.36
SMIM4Q8WVI0 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
SMIM4Q8WVI0 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.77□□□□□ -0.36
SMIM4Q8WVI0 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
SMIM4Q8WVI0 AC131212.3-201ENST00000624087 4219 ntBASIC12.77□□□□□ -0.36
SMIM4Q8WVI0 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SMIM4Q8WVI0 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
SMIM4Q8WVI0 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 UPK3BP1-201ENST00000428678 509 ntBASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 SPDYE11-202ENST00000450699 704 ntBASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 SPDYE9P-201ENST00000570642 692 ntBASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 AC092364.2-202ENST00000597012 1073 ntBASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 SPDYE10P-202ENST00000612005 668 ntBASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 SPDYE8P-202ENST00000612377 668 ntBASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 AL513190.1-201ENST00000621254 727 ntBASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 AL365181.3-201ENST00000605886 3222 ntBASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 NCLP1-201ENST00000445357 1963 ntBASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 AC118758.2-201ENST00000614242 2813 ntBASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 KRT8P14-201ENST00000414254 1442 ntBASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms