Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL22A1Q8NFW1 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL22A1Q8NFW1 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.13■□□□□ 0.65
COL22A1Q8NFW1 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC19.13■□□□□ 0.65
COL22A1Q8NFW1 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC19.13■□□□□ 0.65
COL22A1Q8NFW1 AL161932.2-201ENST00000435436 679 ntBASIC19.13■□□□□ 0.65
COL22A1Q8NFW1 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC19.13■□□□□ 0.65
COL22A1Q8NFW1 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC19.13■□□□□ 0.65
COL22A1Q8NFW1 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC19.13■□□□□ 0.65
COL22A1Q8NFW1 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC19.13■□□□□ 0.65
COL22A1Q8NFW1 PSME2-217ENST00000615264 874 ntTSL 5 BASIC19.13■□□□□ 0.65
COL22A1Q8NFW1 PSME2-218ENST00000630027 185 ntTSL 3 BASIC19.13■□□□□ 0.65
COL22A1Q8NFW1 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC19.13■□□□□ 0.65
COL22A1Q8NFW1 AC092850.2-201ENST00000623821 2697 ntBASIC19.13■□□□□ 0.65
COL22A1Q8NFW1 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
COL22A1Q8NFW1 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL22A1Q8NFW1 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL22A1Q8NFW1 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL22A1Q8NFW1 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL22A1Q8NFW1 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC19.13■□□□□ 0.65
COL22A1Q8NFW1 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL22A1Q8NFW1 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL22A1Q8NFW1 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL22A1Q8NFW1 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.12■□□□□ 0.65
COL22A1Q8NFW1 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC19.12■□□□□ 0.65
COL22A1Q8NFW1 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL22A1Q8NFW1 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL22A1Q8NFW1 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL22A1Q8NFW1 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL22A1Q8NFW1 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL22A1Q8NFW1 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL22A1Q8NFW1 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC19.12■□□□□ 0.65
COL22A1Q8NFW1 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL22A1Q8NFW1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL22A1Q8NFW1 FAU-201ENST00000279259 461 ntTSL 2 BASIC19.12■□□□□ 0.65
COL22A1Q8NFW1 CCL25-202ENST00000315626 450 ntTSL 2 BASIC19.12■□□□□ 0.65
COL22A1Q8NFW1 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL22A1Q8NFW1 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL22A1Q8NFW1 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC19.12■□□□□ 0.65
COL22A1Q8NFW1 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
COL22A1Q8NFW1 OLA1P2-201ENST00000395519 1264 ntBASIC19.12■□□□□ 0.65
COL22A1Q8NFW1 HNRNPA1P21-201ENST00000424115 961 ntBASIC19.12■□□□□ 0.65
COL22A1Q8NFW1 FDPSP7-201ENST00000429043 1054 ntBASIC19.12■□□□□ 0.65
COL22A1Q8NFW1 CDK4P1-201ENST00000454213 828 ntBASIC19.12■□□□□ 0.65
COL22A1Q8NFW1 SLC25A15P3-201ENST00000505530 290 ntBASIC19.12■□□□□ 0.65
COL22A1Q8NFW1 LY6E-215ENST00000523847 427 ntTSL 3 BASIC19.12■□□□□ 0.65
COL22A1Q8NFW1 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
COL22A1Q8NFW1 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
COL22A1Q8NFW1 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC19.12■□□□□ 0.65
COL22A1Q8NFW1 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
COL22A1Q8NFW1 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL22A1Q8NFW1 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC19.12■□□□□ 0.65
COL22A1Q8NFW1 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL22A1Q8NFW1 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL22A1Q8NFW1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
COL22A1Q8NFW1 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
COL22A1Q8NFW1 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC19.12■□□□□ 0.65
COL22A1Q8NFW1 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL22A1Q8NFW1 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL22A1Q8NFW1 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 U73169.1-201ENST00000395152 367 ntBASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 AHCYP3-201ENST00000420053 1279 ntBASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 FAM197Y6-201ENST00000420524 766 ntBASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 HNRNPA1P25-201ENST00000422644 937 ntBASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 AL359219.1-201ENST00000556311 934 ntBASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 AC006986.1-201ENST00000612764 241 ntBASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 FAM226B-201ENST00000602508 1490 ntBASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms