Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 AC015936.2-201ENST00000593177 259 ntBASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 AC008735.3-201ENST00000596646 500 ntBASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 AGAP7P-201ENST00000582299 2062 ntBASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 AGAP14-201ENST00000624701 2060 ntBASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 AC063926.2-201ENST00000623766 1308 ntBASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 KRT8P14-201ENST00000414254 1442 ntBASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
C11orf42Q8N5U0 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
C11orf42Q8N5U0 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
C11orf42Q8N5U0 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
C11orf42Q8N5U0 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.52□□□□□ -0.4
C11orf42Q8N5U0 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.52□□□□□ -0.4
C11orf42Q8N5U0 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
C11orf42Q8N5U0 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
C11orf42Q8N5U0 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
C11orf42Q8N5U0 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
C11orf42Q8N5U0 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
C11orf42Q8N5U0 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.52□□□□□ -0.4
C11orf42Q8N5U0 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
C11orf42Q8N5U0 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
C11orf42Q8N5U0 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.52□□□□□ -0.41
C11orf42Q8N5U0 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
C11orf42Q8N5U0 ACTBP8-201ENST00000403258 1108 ntBASIC12.52□□□□□ -0.41
C11orf42Q8N5U0 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.52□□□□□ -0.41
C11orf42Q8N5U0 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.52□□□□□ -0.41
C11orf42Q8N5U0 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC12.52□□□□□ -0.41
C11orf42Q8N5U0 AC005034.1-201ENST00000426657 489 ntBASIC12.52□□□□□ -0.41
C11orf42Q8N5U0 TTTY23B-201ENST00000442790 549 ntBASIC12.52□□□□□ -0.41
C11orf42Q8N5U0 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC12.52□□□□□ -0.41
C11orf42Q8N5U0 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
C11orf42Q8N5U0 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC12.52□□□□□ -0.41
C11orf42Q8N5U0 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC12.52□□□□□ -0.41
C11orf42Q8N5U0 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.52□□□□□ -0.41
C11orf42Q8N5U0 AC068587.3-201ENST00000526613 355 ntBASIC12.52□□□□□ -0.41
C11orf42Q8N5U0 PTP4A1P2-201ENST00000546033 454 ntBASIC12.52□□□□□ -0.41
C11orf42Q8N5U0 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
C11orf42Q8N5U0 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC12.52□□□□□ -0.41
C11orf42Q8N5U0 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC12.52□□□□□ -0.41
C11orf42Q8N5U0 AL035252.4-201ENST00000624174 288 ntBASIC12.52□□□□□ -0.41
C11orf42Q8N5U0 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
C11orf42Q8N5U0 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.52□□□□□ -0.41
C11orf42Q8N5U0 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
C11orf42Q8N5U0 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
C11orf42Q8N5U0 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
C11orf42Q8N5U0 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
C11orf42Q8N5U0 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.41
C11orf42Q8N5U0 AC134312.5-201ENST00000568031 1313 ntBASIC12.52□□□□□ -0.41
C11orf42Q8N5U0 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
C11orf42Q8N5U0 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
C11orf42Q8N5U0 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
C11orf42Q8N5U0 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
C11orf42Q8N5U0 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
C11orf42Q8N5U0 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
C11orf42Q8N5U0 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
C11orf42Q8N5U0 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC12.52□□□□□ -0.41
C11orf42Q8N5U0 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
C11orf42Q8N5U0 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
C11orf42Q8N5U0 AC067750.1-201ENST00000608826 6545 ntBASIC12.52□□□□□ -0.41
C11orf42Q8N5U0 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.52□□□□□ -0.41
C11orf42Q8N5U0 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms