Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
BEST3Q8N1M1 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BEST3Q8N1M1 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
BEST3Q8N1M1 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.91□□□□□ -0.18
BEST3Q8N1M1 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
BEST3Q8N1M1 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
BEST3Q8N1M1 MIR1247-201ENST00000408206 136 ntBASIC13.91□□□□□ -0.18
BEST3Q8N1M1 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.91□□□□□ -0.18
BEST3Q8N1M1 AC006033.1-201ENST00000440505 426 ntBASIC13.91□□□□□ -0.18
BEST3Q8N1M1 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.91□□□□□ -0.18
BEST3Q8N1M1 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.91□□□□□ -0.18
BEST3Q8N1M1 AP003171.2-201ENST00000528208 925 ntBASIC13.91□□□□□ -0.18
BEST3Q8N1M1 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
BEST3Q8N1M1 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
BEST3Q8N1M1 AC106820.3-201ENST00000561653 397 ntBASIC13.91□□□□□ -0.18
BEST3Q8N1M1 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
BEST3Q8N1M1 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.91□□□□□ -0.18
BEST3Q8N1M1 AC073413.1-201ENST00000603927 732 ntBASIC13.91□□□□□ -0.18
BEST3Q8N1M1 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
BEST3Q8N1M1 AC138466.3-201ENST00000619983 221 ntBASIC13.91□□□□□ -0.18
BEST3Q8N1M1 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
BEST3Q8N1M1 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
BEST3Q8N1M1 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BEST3Q8N1M1 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BEST3Q8N1M1 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BEST3Q8N1M1 KRT8P4-201ENST00000509735 1454 ntBASIC13.91□□□□□ -0.18
BEST3Q8N1M1 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.91□□□□□ -0.18
BEST3Q8N1M1 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
BEST3Q8N1M1 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BEST3Q8N1M1 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.91□□□□□ -0.18
BEST3Q8N1M1 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BEST3Q8N1M1 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.91□□□□□ -0.18
BEST3Q8N1M1 AL137783.1-201ENST00000623494 1896 ntBASIC13.91□□□□□ -0.18
BEST3Q8N1M1 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
BEST3Q8N1M1 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.91□□□□□ -0.18
BEST3Q8N1M1 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BEST3Q8N1M1 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 AL133338.1-201ENST00000565695 1517 ntBASIC13.9□□□□□ -0.18
BEST3Q8N1M1 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 FTLP10-202ENST00000505798 471 ntBASIC13.9□□□□□ -0.18
BEST3Q8N1M1 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 AC104982.3-201ENST00000581995 514 ntBASIC13.9□□□□□ -0.18
BEST3Q8N1M1 MIR3615-201ENST00000581999 87 ntBASIC13.9□□□□□ -0.18
BEST3Q8N1M1 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 AL096828.3-201ENST00000615354 462 ntBASIC13.9□□□□□ -0.18
BEST3Q8N1M1 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 AC136621.1-201ENST00000624017 2304 ntBASIC13.9□□□□□ -0.18
BEST3Q8N1M1 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
BEST3Q8N1M1 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
BEST3Q8N1M1 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
BEST3Q8N1M1 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
BEST3Q8N1M1 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.9□□□□□ -0.19
BEST3Q8N1M1 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms