Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AC091544.8-201ENST00000619490 361 ntBASIC16.6■□□□□ 0.25
TRIM50Q86XT4 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TRIM50Q86XT4 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM50Q86XT4 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM50Q86XT4 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM50Q86XT4 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM50Q86XT4 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TRIM50Q86XT4 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.6■□□□□ 0.25
TRIM50Q86XT4 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM50Q86XT4 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM50Q86XT4 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM50Q86XT4 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.6■□□□□ 0.25
TRIM50Q86XT4 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM50Q86XT4 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM50Q86XT4 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM50Q86XT4 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM50Q86XT4 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM50Q86XT4 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TRIM50Q86XT4 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM50Q86XT4 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 MIR769-201ENST00000390225 118 ntBASIC16.59■□□□□ 0.25
TRIM50Q86XT4 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 AL109954.1-202ENST00000564051 2148 ntBASIC16.59■□□□□ 0.25
TRIM50Q86XT4 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 RN7SL163P-201ENST00000583100 276 ntBASIC16.59■□□□□ 0.25
TRIM50Q86XT4 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 AC090164.2-201ENST00000611487 516 ntBASIC16.59■□□□□ 0.25
TRIM50Q86XT4 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 AC008132.1-202ENST00000342005 1389 ntBASIC16.59■□□□□ 0.25
TRIM50Q86XT4 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM50Q86XT4 MBLAC2-202ENST00000514906 1936 ntBASIC16.58■□□□□ 0.25
TRIM50Q86XT4 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM50Q86XT4 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM50Q86XT4 ACE3P-201ENST00000423435 1973 ntBASIC16.58■□□□□ 0.25
TRIM50Q86XT4 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM50Q86XT4 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM50Q86XT4 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.58■□□□□ 0.25
TRIM50Q86XT4 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM50Q86XT4 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM50Q86XT4 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM50Q86XT4 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.58■□□□□ 0.25
TRIM50Q86XT4 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM50Q86XT4 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM50Q86XT4 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM50Q86XT4 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
TRIM50Q86XT4 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.58■□□□□ 0.25
TRIM50Q86XT4 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM50Q86XT4 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM50Q86XT4 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM50Q86XT4 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM50Q86XT4 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM50Q86XT4 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM50Q86XT4 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM50Q86XT4 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
TRIM50Q86XT4 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.58■□□□□ 0.24
TRIM50Q86XT4 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.58■□□□□ 0.24
TRIM50Q86XT4 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM50Q86XT4 TLE1P1-201ENST00000422965 589 ntBASIC16.58■□□□□ 0.24
TRIM50Q86XT4 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM50Q86XT4 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.58■□□□□ 0.24
TRIM50Q86XT4 IMP3P2-201ENST00000489760 475 ntBASIC16.58■□□□□ 0.24
TRIM50Q86XT4 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM50Q86XT4 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
TRIM50Q86XT4 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16.58■□□□□ 0.24
TRIM50Q86XT4 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms