Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.5■□□□□ 0.07
CCDC25Q86WR0 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC25Q86WR0 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC25Q86WR0 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.5■□□□□ 0.07
CCDC25Q86WR0 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC25Q86WR0 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC25Q86WR0 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC25Q86WR0 AL137783.1-201ENST00000623494 1896 ntBASIC15.5■□□□□ 0.07
CCDC25Q86WR0 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC25Q86WR0 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC25Q86WR0 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC25Q86WR0 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC25Q86WR0 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC25Q86WR0 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC25Q86WR0 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CCDC25Q86WR0 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC25Q86WR0 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CCDC25Q86WR0 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC25Q86WR0 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC25Q86WR0 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC25Q86WR0 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC25Q86WR0 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CCDC25Q86WR0 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC25Q86WR0 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC25Q86WR0 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC25Q86WR0 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC25Q86WR0 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CCDC25Q86WR0 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CCDC25Q86WR0 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC25Q86WR0 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CCDC25Q86WR0 AC023141.5-201ENST00000458585 616 ntBASIC15.49■□□□□ 0.07
CCDC25Q86WR0 RN7SL618P-201ENST00000477850 296 ntBASIC15.49■□□□□ 0.07
CCDC25Q86WR0 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.49■□□□□ 0.07
CCDC25Q86WR0 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC25Q86WR0 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.49■□□□□ 0.07
CCDC25Q86WR0 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC25Q86WR0 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC25Q86WR0 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC25Q86WR0 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC25Q86WR0 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.49■□□□□ 0.07
CCDC25Q86WR0 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CCDC25Q86WR0 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC25Q86WR0 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC25Q86WR0 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC25Q86WR0 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC25Q86WR0 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC25Q86WR0 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC25Q86WR0 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC25Q86WR0 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC25Q86WR0 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC25Q86WR0 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.49■□□□□ 0.07
CCDC25Q86WR0 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC25Q86WR0 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC25Q86WR0 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.49■□□□□ 0.07
CCDC25Q86WR0 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC25Q86WR0 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CCDC25Q86WR0 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.48■□□□□ 0.07
CCDC25Q86WR0 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC25Q86WR0 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
CCDC25Q86WR0 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC25Q86WR0 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC25Q86WR0 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC15.48■□□□□ 0.07
CCDC25Q86WR0 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CCDC25Q86WR0 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
CCDC25Q86WR0 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC25Q86WR0 MEX3B-202ENST00000558133 4333 ntBASIC15.48■□□□□ 0.07
CCDC25Q86WR0 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC25Q86WR0 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC25Q86WR0 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.48■□□□□ 0.07
CCDC25Q86WR0 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
CCDC25Q86WR0 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC25Q86WR0 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.48■□□□□ 0.07
CCDC25Q86WR0 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC25Q86WR0 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC15.48■□□□□ 0.07
CCDC25Q86WR0 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC25Q86WR0 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC25Q86WR0 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC25Q86WR0 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.48■□□□□ 0.07
CCDC25Q86WR0 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.48■□□□□ 0.07
CCDC25Q86WR0 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC25Q86WR0 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC25Q86WR0 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.48■□□□□ 0.07
CCDC25Q86WR0 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC25Q86WR0 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.48■□□□□ 0.07
CCDC25Q86WR0 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.48■□□□□ 0.07
CCDC25Q86WR0 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.48■□□□□ 0.07
CCDC25Q86WR0 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CCDC25Q86WR0 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.48■□□□□ 0.07
CCDC25Q86WR0 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.48■□□□□ 0.07
CCDC25Q86WR0 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.48■□□□□ 0.07
CCDC25Q86WR0 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CCDC25Q86WR0 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.48■□□□□ 0.07
CCDC25Q86WR0 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.48■□□□□ 0.07
CCDC25Q86WR0 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.48■□□□□ 0.07
CCDC25Q86WR0 AP001059.3-201ENST00000619053 235 ntBASIC15.48■□□□□ 0.07
CCDC25Q86WR0 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.48■□□□□ 0.07
CCDC25Q86WR0 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC25Q86WR0 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC25Q86WR0 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CCDC25Q86WR0 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms