Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CCDC62Q6P9F0 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC62Q6P9F0 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC62Q6P9F0 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC62Q6P9F0 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC62Q6P9F0 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC62Q6P9F0 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC62Q6P9F0 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC62Q6P9F0 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 HLA-DPB2-205ENST00000435074 1188 ntBASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 AC012441.2-201ENST00000444843 739 ntBASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 Z97180.1-201ENST00000445173 988 ntBASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 AC131206.1-201ENST00000538078 1211 ntBASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 AL161670.2-201ENST00000557650 1227 ntBASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 AL136295.7-201ENST00000619226 1200 ntBASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 SALL4P5-201ENST00000419001 1760 ntBASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 AL161772.1-201ENST00000610494 4412 ntBASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.73■□□□□ 0.27
CCDC62Q6P9F0 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 AL008718.2-201ENST00000609206 1313 ntBASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 GCOM2-201ENST00000509133 1104 ntBASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 FAM90A7P-201ENST00000382628 1395 ntBASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 FAM90A23P-201ENST00000400136 1395 ntBASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 MBLAC2-202ENST00000514906 1936 ntBASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.72■□□□□ 0.27
CCDC62Q6P9F0 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC62Q6P9F0 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC62Q6P9F0 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms