Protein–RNA interactions for Protein: Q5VWM5

PRAMEF9, PRAME family member 9/15, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9Q5VWM5 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
PRAMEF9Q5VWM5 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PRAMEF9Q5VWM5 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PRAMEF9Q5VWM5 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PRAMEF9Q5VWM5 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
PRAMEF9Q5VWM5 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.33□□□□□ -0.12
PRAMEF9Q5VWM5 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PRAMEF9Q5VWM5 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.33□□□□□ -0.12
PRAMEF9Q5VWM5 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.33□□□□□ -0.12
PRAMEF9Q5VWM5 RN7SKP175-201ENST00000408472 289 ntBASIC14.33□□□□□ -0.12
PRAMEF9Q5VWM5 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PRAMEF9Q5VWM5 COX20P2-201ENST00000452636 358 ntBASIC14.33□□□□□ -0.12
PRAMEF9Q5VWM5 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.33□□□□□ -0.12
PRAMEF9Q5VWM5 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PRAMEF9Q5VWM5 AC078819.1-201ENST00000547454 765 ntBASIC14.33□□□□□ -0.12
PRAMEF9Q5VWM5 AC012085.1-201ENST00000548270 765 ntBASIC14.33□□□□□ -0.12
PRAMEF9Q5VWM5 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.33□□□□□ -0.12
PRAMEF9Q5VWM5 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.33□□□□□ -0.12
PRAMEF9Q5VWM5 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.33□□□□□ -0.12
PRAMEF9Q5VWM5 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.33□□□□□ -0.12
PRAMEF9Q5VWM5 LINC02084-201ENST00000606069 1096 ntBASIC14.33□□□□□ -0.12
PRAMEF9Q5VWM5 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.33□□□□□ -0.12
PRAMEF9Q5VWM5 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.33□□□□□ -0.12
PRAMEF9Q5VWM5 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.33□□□□□ -0.12
PRAMEF9Q5VWM5 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PRAMEF9Q5VWM5 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PRAMEF9Q5VWM5 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PRAMEF9Q5VWM5 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
PRAMEF9Q5VWM5 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PRAMEF9Q5VWM5 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PRAMEF9Q5VWM5 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.33□□□□□ -0.12
PRAMEF9Q5VWM5 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PRAMEF9Q5VWM5 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
PRAMEF9Q5VWM5 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PRAMEF9Q5VWM5 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PRAMEF9Q5VWM5 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PRAMEF9Q5VWM5 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PRAMEF9Q5VWM5 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
PRAMEF9Q5VWM5 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PRAMEF9Q5VWM5 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PRAMEF9Q5VWM5 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PRAMEF9Q5VWM5 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PRAMEF9Q5VWM5 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 MYADML-201ENST00000474610 2147 ntBASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 CNN2P8-201ENST00000421872 913 ntBASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 RNA5SP486-201ENST00000515961 83 ntBASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 AC103988.2-201ENST00000561804 725 ntBASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 BX088702.1-201ENST00000610784 235 ntBASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRAMEF9Q5VWM5 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms