Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 BX842568.4-201ENST00000421222 227 ntBASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 AC022447.6-201ENST00000515522 438 ntBASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 AC010336.2-201ENST00000564226 506 ntBASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 TEX28P1-201ENST00000613479 1221 ntBASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 TEX28P2-201ENST00000617764 1221 ntBASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 AL109936.8-201ENST00000641772 604 ntBASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
LCN1P1Q5VSP4 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
LCN1P1Q5VSP4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LCN1P1Q5VSP4 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
LCN1P1Q5VSP4 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
LCN1P1Q5VSP4 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.58□□□□□ -0.23
LCN1P1Q5VSP4 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.23
LCN1P1Q5VSP4 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
LCN1P1Q5VSP4 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
LCN1P1Q5VSP4 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.23
LCN1P1Q5VSP4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
LCN1P1Q5VSP4 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
LCN1P1Q5VSP4 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LCN1P1Q5VSP4 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.58□□□□□ -0.24
LCN1P1Q5VSP4 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
LCN1P1Q5VSP4 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LCN1P1Q5VSP4 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LCN1P1Q5VSP4 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
LCN1P1Q5VSP4 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LCN1P1Q5VSP4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LCN1P1Q5VSP4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LCN1P1Q5VSP4 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LCN1P1Q5VSP4 AC092053.3-201ENST00000641308 4975 ntBASIC13.58□□□□□ -0.24
LCN1P1Q5VSP4 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
LCN1P1Q5VSP4 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LCN1P1Q5VSP4 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.58□□□□□ -0.24
LCN1P1Q5VSP4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LCN1P1Q5VSP4 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
LCN1P1Q5VSP4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LCN1P1Q5VSP4 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
LCN1P1Q5VSP4 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.58□□□□□ -0.24
LCN1P1Q5VSP4 UPF3AP3-201ENST00000420996 769 ntBASIC13.58□□□□□ -0.24
LCN1P1Q5VSP4 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.58□□□□□ -0.24
LCN1P1Q5VSP4 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.58□□□□□ -0.24
LCN1P1Q5VSP4 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.58□□□□□ -0.24
LCN1P1Q5VSP4 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.58□□□□□ -0.24
LCN1P1Q5VSP4 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms