Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 AC092570.1-201ENST00000414446 469 ntBASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 STK24P1-201ENST00000455035 1291 ntBASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 RN7SL357P-201ENST00000581065 298 ntBASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 AC010531.8-201ENST00000623341 685 ntBASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 SHMT1P1-201ENST00000419974 1312 ntBASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 BCAS2P2-201ENST00000425064 674 ntBASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 RN7SL455P-201ENST00000580629 282 ntBASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 AL162727.3-201ENST00000635661 2787 ntBASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 AC015688.4-201ENST00000580780 1647 ntBASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 GUSBP10-201ENST00000417412 665 ntBASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 AC092862.1-201ENST00000541534 533 ntBASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 GSN-215ENST00000545652 2428 ntTSL 2 BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 AL354702.1-201ENST00000442006 1960 ntBASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 CCT8L1P-201ENST00000465400 1674 ntBASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 AC092896.1-201ENST00000465850 380 ntBASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 HINT1-205ENST00000508488 703 ntTSL 2 BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 RN7SL556P-201ENST00000582856 298 ntBASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC9.66□□□□□ -0.86
VPS13DQ5THJ4 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC9.65□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms