Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.39■□□□□ 0.53
RC3H1Q5TC82 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RC3H1Q5TC82 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RC3H1Q5TC82 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RC3H1Q5TC82 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RC3H1Q5TC82 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RC3H1Q5TC82 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RC3H1Q5TC82 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.39■□□□□ 0.53
RC3H1Q5TC82 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RC3H1Q5TC82 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RC3H1Q5TC82 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.38■□□□□ 0.53
RC3H1Q5TC82 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RC3H1Q5TC82 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RC3H1Q5TC82 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RC3H1Q5TC82 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RC3H1Q5TC82 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RC3H1Q5TC82 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RC3H1Q5TC82 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RC3H1Q5TC82 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RC3H1Q5TC82 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RC3H1Q5TC82 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RC3H1Q5TC82 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RC3H1Q5TC82 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC18.38■□□□□ 0.53
RC3H1Q5TC82 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC18.38■□□□□ 0.53
RC3H1Q5TC82 AC098934.1-203ENST00000442868 1262 ntBASIC18.38■□□□□ 0.53
RC3H1Q5TC82 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC18.38■□□□□ 0.53
RC3H1Q5TC82 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC18.38■□□□□ 0.53
RC3H1Q5TC82 RN7SL23P-201ENST00000484055 275 ntBASIC18.38■□□□□ 0.53
RC3H1Q5TC82 PPIA-208ENST00000489459 907 ntTSL 2 BASIC18.38■□□□□ 0.53
RC3H1Q5TC82 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC18.38■□□□□ 0.53
RC3H1Q5TC82 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC18.38■□□□□ 0.53
RC3H1Q5TC82 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RC3H1Q5TC82 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC18.38■□□□□ 0.53
RC3H1Q5TC82 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC18.38■□□□□ 0.53
RC3H1Q5TC82 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC18.38■□□□□ 0.53
RC3H1Q5TC82 PPIA-210ENST00000620047 827 ntTSL 5 BASIC18.38■□□□□ 0.53
RC3H1Q5TC82 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RC3H1Q5TC82 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RC3H1Q5TC82 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RC3H1Q5TC82 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RC3H1Q5TC82 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.38■□□□□ 0.53
RC3H1Q5TC82 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RC3H1Q5TC82 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RC3H1Q5TC82 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC18.38■□□□□ 0.53
RC3H1Q5TC82 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RC3H1Q5TC82 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RC3H1Q5TC82 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RC3H1Q5TC82 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RC3H1Q5TC82 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RC3H1Q5TC82 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC18.37■□□□□ 0.53
RC3H1Q5TC82 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC18.37■□□□□ 0.53
RC3H1Q5TC82 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RC3H1Q5TC82 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RC3H1Q5TC82 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RC3H1Q5TC82 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.37■□□□□ 0.53
RC3H1Q5TC82 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RC3H1Q5TC82 PYY2-201ENST00000315776 282 ntBASIC18.37■□□□□ 0.53
RC3H1Q5TC82 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RC3H1Q5TC82 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RC3H1Q5TC82 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RC3H1Q5TC82 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RC3H1Q5TC82 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC18.37■□□□□ 0.53
RC3H1Q5TC82 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC18.37■□□□□ 0.53
RC3H1Q5TC82 AC093826.1-201ENST00000508655 993 ntBASIC18.37■□□□□ 0.53
RC3H1Q5TC82 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC18.37■□□□□ 0.53
RC3H1Q5TC82 AC226150.1-201ENST00000544259 466 ntBASIC18.37■□□□□ 0.53
RC3H1Q5TC82 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC18.37■□□□□ 0.53
RC3H1Q5TC82 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC18.37■□□□□ 0.53
RC3H1Q5TC82 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.37■□□□□ 0.53
RC3H1Q5TC82 HKR1-225ENST00000592168 566 ntTSL 4 BASIC18.37■□□□□ 0.53
RC3H1Q5TC82 ETV2-207ENST00000619399 994 ntTSL 5 BASIC18.37■□□□□ 0.53
RC3H1Q5TC82 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
RC3H1Q5TC82 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RC3H1Q5TC82 AC025183.3-201ENST00000623526 1482 ntBASIC18.37■□□□□ 0.53
RC3H1Q5TC82 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RC3H1Q5TC82 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RC3H1Q5TC82 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RC3H1Q5TC82 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC18.37■□□□□ 0.53
RC3H1Q5TC82 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RC3H1Q5TC82 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RC3H1Q5TC82 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RC3H1Q5TC82 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC18.37■□□□□ 0.53
RC3H1Q5TC82 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RC3H1Q5TC82 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
RC3H1Q5TC82 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
RC3H1Q5TC82 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.37■□□□□ 0.53
RC3H1Q5TC82 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RC3H1Q5TC82 CICP23-201ENST00000605013 2741 ntBASIC18.36■□□□□ 0.53
RC3H1Q5TC82 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RC3H1Q5TC82 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.36■□□□□ 0.53
RC3H1Q5TC82 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RC3H1Q5TC82 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RC3H1Q5TC82 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.36■□□□□ 0.53
RC3H1Q5TC82 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
RC3H1Q5TC82 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RC3H1Q5TC82 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RC3H1Q5TC82 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RC3H1Q5TC82 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
RC3H1Q5TC82 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
RC3H1Q5TC82 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms