Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.05□□□□□ -0.32
HIST1H3AP68431 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
HIST1H3AP68431 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
HIST1H3AP68431 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H3AP68431 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H3AP68431 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.05□□□□□ -0.32
HIST1H3AP68431 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H3AP68431 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H3AP68431 MRPL37P1-201ENST00000592451 1337 ntBASIC13.05□□□□□ -0.32
HIST1H3AP68431 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H3AP68431 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H3AP68431 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H3AP68431 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.05□□□□□ -0.32
HIST1H3AP68431 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
HIST1H3AP68431 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
HIST1H3AP68431 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
HIST1H3AP68431 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
HIST1H3AP68431 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H3AP68431 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H3AP68431 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.05□□□□□ -0.32
HIST1H3AP68431 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
HIST1H3AP68431 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H3AP68431 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.04□□□□□ -0.32
HIST1H3AP68431 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H3AP68431 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
HIST1H3AP68431 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.04□□□□□ -0.32
HIST1H3AP68431 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H3AP68431 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H3AP68431 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H3AP68431 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H3AP68431 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H3AP68431 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
HIST1H3AP68431 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
HIST1H3AP68431 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H3AP68431 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H3AP68431 HSPA7-201ENST00000445535 1927 ntBASIC13.04□□□□□ -0.32
HIST1H3AP68431 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
HIST1H3AP68431 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.04□□□□□ -0.32
HIST1H3AP68431 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H3AP68431 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.04□□□□□ -0.32
HIST1H3AP68431 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H3AP68431 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H3AP68431 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.04□□□□□ -0.32
HIST1H3AP68431 AC007389.4-201ENST00000454674 793 ntBASIC13.04□□□□□ -0.32
HIST1H3AP68431 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.04□□□□□ -0.32
HIST1H3AP68431 RN7SL752P-201ENST00000463779 287 ntBASIC13.04□□□□□ -0.32
HIST1H3AP68431 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.04□□□□□ -0.32
HIST1H3AP68431 FTLP10-202ENST00000505798 471 ntBASIC13.04□□□□□ -0.32
HIST1H3AP68431 AC106760.1-201ENST00000508690 800 ntBASIC13.04□□□□□ -0.32
HIST1H3AP68431 ALG3P1-201ENST00000508806 1114 ntBASIC13.04□□□□□ -0.32
HIST1H3AP68431 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.04□□□□□ -0.32
HIST1H3AP68431 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.04□□□□□ -0.32
HIST1H3AP68431 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.04□□□□□ -0.32
HIST1H3AP68431 AC025279.2-201ENST00000569730 653 ntBASIC13.04□□□□□ -0.32
HIST1H3AP68431 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
HIST1H3AP68431 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
HIST1H3AP68431 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.04□□□□□ -0.32
HIST1H3AP68431 BX088702.1-201ENST00000610784 235 ntBASIC13.04□□□□□ -0.32
HIST1H3AP68431 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.04□□□□□ -0.32
HIST1H3AP68431 AP001002.3-201ENST00000623482 206 ntBASIC13.04□□□□□ -0.32
HIST1H3AP68431 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.04□□□□□ -0.32
HIST1H3AP68431 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H3AP68431 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H3AP68431 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H3AP68431 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H3AP68431 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H3AP68431 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H3AP68431 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.04□□□□□ -0.32
HIST1H3AP68431 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.04□□□□□ -0.32
HIST1H3AP68431 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.04□□□□□ -0.32
HIST1H3AP68431 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
HIST1H3AP68431 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H3AP68431 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
HIST1H3AP68431 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H3AP68431 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H3AP68431 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.04□□□□□ -0.32
HIST1H3AP68431 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H3AP68431 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H3AP68431 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
HIST1H3AP68431 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H3AP68431 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H3AP68431 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.03□□□□□ -0.32
HIST1H3AP68431 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
HIST1H3AP68431 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H3AP68431 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H3AP68431 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H3AP68431 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H3AP68431 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H3AP68431 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.03□□□□□ -0.32
HIST1H3AP68431 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.03□□□□□ -0.32
HIST1H3AP68431 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H3AP68431 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H3AP68431 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H3AP68431 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H3AP68431 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H3AP68431 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H3AP68431 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.03□□□□□ -0.32
HIST1H3AP68431 AC126335.2-201ENST00000623362 4637 ntBASIC13.03□□□□□ -0.32
HIST1H3AP68431 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
HIST1H3AP68431 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms