Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.81■□□□□ 0.28
TPM4P67936 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TPM4P67936 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TPM4P67936 AC004461.1-201ENST00000412461 403 ntBASIC16.81■□□□□ 0.28
TPM4P67936 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.81■□□□□ 0.28
TPM4P67936 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.81■□□□□ 0.28
TPM4P67936 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.81■□□□□ 0.28
TPM4P67936 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM4P67936 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.81■□□□□ 0.28
TPM4P67936 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
TPM4P67936 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.81■□□□□ 0.28
TPM4P67936 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC16.81■□□□□ 0.28
TPM4P67936 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM4P67936 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM4P67936 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TPM4P67936 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM4P67936 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC16.81■□□□□ 0.28
TPM4P67936 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
TPM4P67936 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TPM4P67936 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM4P67936 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
TPM4P67936 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM4P67936 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC16.8■□□□□ 0.28
TPM4P67936 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPM4P67936 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TPM4P67936 AL157414.3-201ENST00000624276 1954 ntBASIC16.8■□□□□ 0.28
TPM4P67936 APP-205ENST00000358918 2366 ntTSL 5 BASIC16.8■□□□□ 0.28
TPM4P67936 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TPM4P67936 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC16.8■□□□□ 0.28
TPM4P67936 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPM4P67936 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.8■□□□□ 0.28
TPM4P67936 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.8■□□□□ 0.28
TPM4P67936 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.8■□□□□ 0.28
TPM4P67936 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.8■□□□□ 0.28
TPM4P67936 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPM4P67936 RN7SL618P-201ENST00000477850 296 ntBASIC16.8■□□□□ 0.28
TPM4P67936 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.8■□□□□ 0.28
TPM4P67936 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.8■□□□□ 0.28
TPM4P67936 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.8■□□□□ 0.28
TPM4P67936 AC004835.2-201ENST00000603762 682 ntBASIC16.8■□□□□ 0.28
TPM4P67936 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.8■□□□□ 0.28
TPM4P67936 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TPM4P67936 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC16.8■□□□□ 0.28
TPM4P67936 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TPM4P67936 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC16.8■□□□□ 0.28
TPM4P67936 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
TPM4P67936 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC16.8■□□□□ 0.28
TPM4P67936 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TPM4P67936 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPM4P67936 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TPM4P67936 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TPM4P67936 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC16.8■□□□□ 0.28
TPM4P67936 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TPM4P67936 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TPM4P67936 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPM4P67936 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
TPM4P67936 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC16.8■□□□□ 0.28
TPM4P67936 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPM4P67936 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
TPM4P67936 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPM4P67936 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.79■□□□□ 0.28
TPM4P67936 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.79■□□□□ 0.28
TPM4P67936 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPM4P67936 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPM4P67936 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC16.79■□□□□ 0.28
TPM4P67936 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPM4P67936 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPM4P67936 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPM4P67936 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TPM4P67936 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPM4P67936 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPM4P67936 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPM4P67936 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC16.79■□□□□ 0.28
TPM4P67936 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TPM4P67936 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPM4P67936 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TPM4P67936 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPM4P67936 PCDHA5-203ENST00000614258 4248 ntBASIC16.79■□□□□ 0.28
TPM4P67936 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPM4P67936 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TPM4P67936 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPM4P67936 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPM4P67936 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPM4P67936 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TPM4P67936 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.79■□□□□ 0.28
TPM4P67936 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TPM4P67936 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TPM4P67936 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.79■□□□□ 0.28
TPM4P67936 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.79■□□□□ 0.28
TPM4P67936 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.79■□□□□ 0.28
TPM4P67936 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.79■□□□□ 0.28
TPM4P67936 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.79■□□□□ 0.28
TPM4P67936 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
TPM4P67936 AP000344.2-201ENST00000512987 629 ntBASIC16.79■□□□□ 0.28
TPM4P67936 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.79■□□□□ 0.28
TPM4P67936 KRT18P58-201ENST00000527480 1120 ntBASIC16.79■□□□□ 0.28
TPM4P67936 AC093520.2-201ENST00000561830 333 ntBASIC16.79■□□□□ 0.28
TPM4P67936 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TPM4P67936 AC004461.2-201ENST00000629517 803 ntBASIC16.79■□□□□ 0.28
TPM4P67936 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms