Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RHBDL3P58872 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC17.4■□□□□ 0.38
RHBDL3P58872 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RHBDL3P58872 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.4■□□□□ 0.38
RHBDL3P58872 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDL3P58872 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDL3P58872 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDL3P58872 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDL3P58872 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDL3P58872 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDL3P58872 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RHBDL3P58872 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RHBDL3P58872 CAP2P1-201ENST00000557743 1390 ntBASIC17.4■□□□□ 0.38
RHBDL3P58872 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDL3P58872 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC17.4■□□□□ 0.38
RHBDL3P58872 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDL3P58872 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
RHBDL3P58872 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.38
RHBDL3P58872 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RHBDL3P58872 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RHBDL3P58872 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
RHBDL3P58872 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RHBDL3P58872 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RHBDL3P58872 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC17.39■□□□□ 0.37
RHBDL3P58872 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RHBDL3P58872 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RHBDL3P58872 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RHBDL3P58872 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RHBDL3P58872 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC17.39■□□□□ 0.37
RHBDL3P58872 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC17.39■□□□□ 0.37
RHBDL3P58872 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC17.39■□□□□ 0.37
RHBDL3P58872 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC17.39■□□□□ 0.37
RHBDL3P58872 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
RHBDL3P58872 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RHBDL3P58872 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RHBDL3P58872 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.39■□□□□ 0.37
RHBDL3P58872 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.39■□□□□ 0.37
RHBDL3P58872 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RHBDL3P58872 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RHBDL3P58872 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RHBDL3P58872 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.39■□□□□ 0.37
RHBDL3P58872 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RHBDL3P58872 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RHBDL3P58872 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RHBDL3P58872 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RHBDL3P58872 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RHBDL3P58872 FAM90A2P-201ENST00000511144 1395 ntBASIC17.39■□□□□ 0.37
RHBDL3P58872 FAM90A25P-201ENST00000528404 1395 ntBASIC17.39■□□□□ 0.37
RHBDL3P58872 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RHBDL3P58872 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.39■□□□□ 0.37
RHBDL3P58872 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RHBDL3P58872 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RHBDL3P58872 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.39■□□□□ 0.37
RHBDL3P58872 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RHBDL3P58872 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RHBDL3P58872 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RHBDL3P58872 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RHBDL3P58872 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
RHBDL3P58872 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RHBDL3P58872 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RHBDL3P58872 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RHBDL3P58872 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RHBDL3P58872 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC17.38■□□□□ 0.37
RHBDL3P58872 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RHBDL3P58872 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RHBDL3P58872 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RHBDL3P58872 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RHBDL3P58872 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RHBDL3P58872 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC17.38■□□□□ 0.37
RHBDL3P58872 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RHBDL3P58872 RNA5SP359-201ENST00000364838 113 ntBASIC17.38■□□□□ 0.37
RHBDL3P58872 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RHBDL3P58872 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC17.38■□□□□ 0.37
RHBDL3P58872 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC17.38■□□□□ 0.37
RHBDL3P58872 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC17.38■□□□□ 0.37
RHBDL3P58872 FGFR3P1-201ENST00000449999 601 ntBASIC17.38■□□□□ 0.37
RHBDL3P58872 MPRIPP1-201ENST00000452433 1089 ntBASIC17.38■□□□□ 0.37
RHBDL3P58872 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC17.38■□□□□ 0.37
RHBDL3P58872 LY6E-208ENST00000520531 490 ntTSL 2 BASIC17.38■□□□□ 0.37
RHBDL3P58872 NEU3-205ENST00000531619 582 ntTSL 5 BASIC17.38■□□□□ 0.37
RHBDL3P58872 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC17.38■□□□□ 0.37
RHBDL3P58872 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC17.38■□□□□ 0.37
RHBDL3P58872 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC17.38■□□□□ 0.37
RHBDL3P58872 AC124068.2-201ENST00000569473 1109 ntBASIC17.38■□□□□ 0.37
RHBDL3P58872 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC17.38■□□□□ 0.37
RHBDL3P58872 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC17.38■□□□□ 0.37
RHBDL3P58872 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC17.38■□□□□ 0.37
RHBDL3P58872 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC17.38■□□□□ 0.37
RHBDL3P58872 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC17.38■□□□□ 0.37
RHBDL3P58872 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RHBDL3P58872 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RHBDL3P58872 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RHBDL3P58872 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RHBDL3P58872 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.38■□□□□ 0.37
RHBDL3P58872 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RHBDL3P58872 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.38■□□□□ 0.37
RHBDL3P58872 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RHBDL3P58872 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RHBDL3P58872 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RHBDL3P58872 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms