Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
SLC25A1P53007 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SLC25A1P53007 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
SLC25A1P53007 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
SLC25A1P53007 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
SLC25A1P53007 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SLC25A1P53007 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SLC25A1P53007 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SLC25A1P53007 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SLC25A1P53007 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SLC25A1P53007 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.27□□□□□ -0.29
SLC25A1P53007 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.27□□□□□ -0.29
SLC25A1P53007 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SLC25A1P53007 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.27□□□□□ -0.29
SLC25A1P53007 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SLC25A1P53007 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.27□□□□□ -0.29
SLC25A1P53007 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.27□□□□□ -0.29
SLC25A1P53007 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SLC25A1P53007 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.27□□□□□ -0.29
SLC25A1P53007 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.27□□□□□ -0.29
SLC25A1P53007 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SLC25A1P53007 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
SLC25A1P53007 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.27□□□□□ -0.29
SLC25A1P53007 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.27□□□□□ -0.29
SLC25A1P53007 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.27□□□□□ -0.29
SLC25A1P53007 AC009118.2-201ENST00000613275 655 ntBASIC13.27□□□□□ -0.29
SLC25A1P53007 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
SLC25A1P53007 AC106028.4-201ENST00000614509 607 ntBASIC13.27□□□□□ -0.29
SLC25A1P53007 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.27□□□□□ -0.29
SLC25A1P53007 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
SLC25A1P53007 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
SLC25A1P53007 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SLC25A1P53007 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
SLC25A1P53007 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SLC25A1P53007 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SLC25A1P53007 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.27□□□□□ -0.29
SLC25A1P53007 KRT8P24-201ENST00000560290 1559 ntBASIC13.27□□□□□ -0.29
SLC25A1P53007 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SLC25A1P53007 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.27□□□□□ -0.29
SLC25A1P53007 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SLC25A1P53007 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SLC25A1P53007 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
SLC25A1P53007 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
SLC25A1P53007 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SLC25A1P53007 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SLC25A1P53007 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
SLC25A1P53007 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SLC25A1P53007 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.27□□□□□ -0.29
SLC25A1P53007 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.27□□□□□ -0.29
SLC25A1P53007 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SLC25A1P53007 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SLC25A1P53007 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
SLC25A1P53007 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.27□□□□□ -0.29
SLC25A1P53007 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
SLC25A1P53007 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLC25A1P53007 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.26□□□□□ -0.29
SLC25A1P53007 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SLC25A1P53007 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
SLC25A1P53007 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLC25A1P53007 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLC25A1P53007 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SLC25A1P53007 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLC25A1P53007 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLC25A1P53007 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLC25A1P53007 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLC25A1P53007 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
SLC25A1P53007 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SLC25A1P53007 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLC25A1P53007 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLC25A1P53007 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SLC25A1P53007 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.26□□□□□ -0.29
SLC25A1P53007 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.26□□□□□ -0.29
SLC25A1P53007 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
SLC25A1P53007 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLC25A1P53007 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SLC25A1P53007 AC215219.1-201ENST00000400706 1817 ntBASIC13.26□□□□□ -0.29
SLC25A1P53007 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.26□□□□□ -0.29
SLC25A1P53007 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLC25A1P53007 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.26□□□□□ -0.29
SLC25A1P53007 PMS2P2-201ENST00000425039 1128 ntBASIC13.26□□□□□ -0.29
SLC25A1P53007 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLC25A1P53007 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SLC25A1P53007 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLC25A1P53007 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.26□□□□□ -0.29
SLC25A1P53007 AL391825.1-201ENST00000457671 1364 ntBASIC13.26□□□□□ -0.29
SLC25A1P53007 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLC25A1P53007 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
SLC25A1P53007 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SLC25A1P53007 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SLC25A1P53007 KRT18P25-201ENST00000508931 1278 ntBASIC13.26□□□□□ -0.29
SLC25A1P53007 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
SLC25A1P53007 MBLAC2-202ENST00000514906 1936 ntBASIC13.26□□□□□ -0.29
SLC25A1P53007 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SLC25A1P53007 AC123567.1-201ENST00000548294 1261 ntBASIC13.26□□□□□ -0.29
SLC25A1P53007 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.26□□□□□ -0.29
SLC25A1P53007 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.26□□□□□ -0.29
SLC25A1P53007 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
SLC25A1P53007 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.26□□□□□ -0.29
SLC25A1P53007 AC005498.2-205ENST00000593218 784 ntBASIC13.26□□□□□ -0.29
SLC25A1P53007 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms