Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC25.58■■□□□ 1.69
SMARCA2P51531 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC25.58■■□□□ 1.68
SMARCA2P51531 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC25.58■■□□□ 1.68
SMARCA2P51531 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
SMARCA2P51531 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC25.57■■□□□ 1.68
SMARCA2P51531 CES3-203ENST00000543856 3178 ntTSL 2 BASIC25.57■■□□□ 1.68
SMARCA2P51531 AC073210.1-201ENST00000414799 232 ntBASIC25.57■■□□□ 1.68
SMARCA2P51531 SEPHS2P1-201ENST00000511618 1162 ntBASIC25.57■■□□□ 1.68
SMARCA2P51531 AC005740.1-201ENST00000515639 522 ntBASIC25.57■■□□□ 1.68
SMARCA2P51531 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
SMARCA2P51531 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SMARCA2P51531 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC25.57■■□□□ 1.68
SMARCA2P51531 TYMSP2-201ENST00000589501 424 ntBASIC25.57■■□□□ 1.68
SMARCA2P51531 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC25.57■■□□□ 1.68
SMARCA2P51531 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SMARCA2P51531 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC25.57■■□□□ 1.68
SMARCA2P51531 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC25.57■■□□□ 1.68
SMARCA2P51531 AC136621.1-201ENST00000624017 2304 ntBASIC25.57■■□□□ 1.68
SMARCA2P51531 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC25.57■■□□□ 1.68
SMARCA2P51531 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SMARCA2P51531 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SMARCA2P51531 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SMARCA2P51531 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC25.57■■□□□ 1.68
SMARCA2P51531 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC25.57■■□□□ 1.68
SMARCA2P51531 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
SMARCA2P51531 AC138761.6-201ENST00000583997 1423 ntBASIC25.57■■□□□ 1.68
SMARCA2P51531 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SMARCA2P51531 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
SMARCA2P51531 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC25.57■■□□□ 1.68
SMARCA2P51531 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SMARCA2P51531 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
SMARCA2P51531 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
SMARCA2P51531 AC092573.1-201ENST00000433054 884 ntBASIC25.56■■□□□ 1.68
SMARCA2P51531 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC25.56■■□□□ 1.68
SMARCA2P51531 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC25.56■■□□□ 1.68
SMARCA2P51531 EMC4-208ENST00000559078 599 ntTSL 3 BASIC25.56■■□□□ 1.68
SMARCA2P51531 AL136982.5-201ENST00000605222 294 ntBASIC25.56■■□□□ 1.68
SMARCA2P51531 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC25.56■■□□□ 1.68
SMARCA2P51531 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
SMARCA2P51531 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SMARCA2P51531 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
SMARCA2P51531 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SMARCA2P51531 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC25.56■■□□□ 1.68
SMARCA2P51531 AC084018.2-201ENST00000613093 2607 ntBASIC25.56■■□□□ 1.68
SMARCA2P51531 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SMARCA2P51531 LTB4R2-202ENST00000528054 3092 ntBASIC25.56■■□□□ 1.68
SMARCA2P51531 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SMARCA2P51531 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SMARCA2P51531 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC25.56■■□□□ 1.68
SMARCA2P51531 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
SMARCA2P51531 OR10N1P-201ENST00000392758 869 ntBASIC25.56■■□□□ 1.68
SMARCA2P51531 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC25.56■■□□□ 1.68
SMARCA2P51531 HNRNPA1P2-207ENST00000432375 960 ntBASIC25.56■■□□□ 1.68
SMARCA2P51531 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC25.56■■□□□ 1.68
SMARCA2P51531 KRT18P62-201ENST00000446618 1287 ntBASIC25.56■■□□□ 1.68
SMARCA2P51531 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC25.56■■□□□ 1.68
SMARCA2P51531 RN7SL128P-201ENST00000467883 305 ntBASIC25.56■■□□□ 1.68
SMARCA2P51531 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC25.56■■□□□ 1.68
SMARCA2P51531 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC25.56■■□□□ 1.68
SMARCA2P51531 COQ4-204ENST00000608951 781 ntTSL 2 BASIC25.56■■□□□ 1.68
SMARCA2P51531 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC25.56■■□□□ 1.68
SMARCA2P51531 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
SMARCA2P51531 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
SMARCA2P51531 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC25.55■■□□□ 1.68
SMARCA2P51531 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SMARCA2P51531 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
SMARCA2P51531 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SMARCA2P51531 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SMARCA2P51531 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
SMARCA2P51531 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC25.55■■□□□ 1.68
SMARCA2P51531 AL365181.1-201ENST00000564032 1828 ntBASIC25.55■■□□□ 1.68
SMARCA2P51531 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SMARCA2P51531 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SMARCA2P51531 PRSS3P1-201ENST00000503996 742 ntBASIC25.55■■□□□ 1.68
SMARCA2P51531 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC25.55■■□□□ 1.68
SMARCA2P51531 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC25.55■■□□□ 1.68
SMARCA2P51531 AC090510.3-201ENST00000615831 821 ntBASIC25.55■■□□□ 1.68
SMARCA2P51531 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SMARCA2P51531 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SMARCA2P51531 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC25.55■■□□□ 1.68
SMARCA2P51531 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SMARCA2P51531 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
SMARCA2P51531 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC25.55■■□□□ 1.68
SMARCA2P51531 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SMARCA2P51531 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC25.54■■□□□ 1.68
SMARCA2P51531 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
SMARCA2P51531 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SMARCA2P51531 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC25.54■■□□□ 1.68
SMARCA2P51531 ASS1P2-201ENST00000439895 1223 ntBASIC25.54■■□□□ 1.68
SMARCA2P51531 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SMARCA2P51531 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
SMARCA2P51531 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC25.54■■□□□ 1.68
SMARCA2P51531 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC25.54■■□□□ 1.68
SMARCA2P51531 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
SMARCA2P51531 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SMARCA2P51531 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC25.54■■□□□ 1.68
SMARCA2P51531 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC25.54■■□□□ 1.68
SMARCA2P51531 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SMARCA2P51531 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SMARCA2P51531 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms