Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
UBE2AP49459 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
UBE2AP49459 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
UBE2AP49459 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
UBE2AP49459 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC9.56□□□□□ -0.88
UBE2AP49459 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
UBE2AP49459 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC9.56□□□□□ -0.88
UBE2AP49459 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
UBE2AP49459 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
UBE2AP49459 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
UBE2AP49459 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC9.56□□□□□ -0.88
UBE2AP49459 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC9.56□□□□□ -0.88
UBE2AP49459 MEX3B-202ENST00000558133 4333 ntBASIC9.56□□□□□ -0.88
UBE2AP49459 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC9.56□□□□□ -0.88
UBE2AP49459 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
UBE2AP49459 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
UBE2AP49459 PNMT-202ENST00000394246 821 ntTSL 2 BASIC9.56□□□□□ -0.88
UBE2AP49459 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
UBE2AP49459 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC9.56□□□□□ -0.88
UBE2AP49459 KRT18P64-201ENST00000434946 1219 ntBASIC9.56□□□□□ -0.88
UBE2AP49459 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC9.56□□□□□ -0.88
UBE2AP49459 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
UBE2AP49459 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC9.56□□□□□ -0.88
UBE2AP49459 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC9.56□□□□□ -0.88
UBE2AP49459 STOM-203ENST00000538954 1257 ntTSL 5 BASIC9.56□□□□□ -0.88
UBE2AP49459 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC9.56□□□□□ -0.88
UBE2AP49459 AC044860.1-202ENST00000559481 777 ntBASIC9.56□□□□□ -0.88
UBE2AP49459 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
UBE2AP49459 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC9.56□□□□□ -0.88
UBE2AP49459 AC015911.4-201ENST00000588022 1070 ntBASIC9.56□□□□□ -0.88
UBE2AP49459 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC9.56□□□□□ -0.88
UBE2AP49459 INO80C-210ENST00000590757 595 ntTSL 2 BASIC9.56□□□□□ -0.88
UBE2AP49459 AC025181.2-201ENST00000606994 802 ntBASIC9.56□□□□□ -0.88
UBE2AP49459 5S_rRNA.22-201ENST00000614916 106 ntBASIC9.56□□□□□ -0.88
UBE2AP49459 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
UBE2AP49459 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC9.56□□□□□ -0.88
UBE2AP49459 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
UBE2AP49459 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
UBE2AP49459 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
UBE2AP49459 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC9.56□□□□□ -0.88
UBE2AP49459 AC006254.1-201ENST00000468472 5640 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
UBE2AP49459 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
UBE2AP49459 ZMIZ1-202ENST00000446377 6686 ntTSL 5 BASIC9.56□□□□□ -0.88
UBE2AP49459 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC9.56□□□□□ -0.88
UBE2AP49459 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
UBE2AP49459 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
UBE2AP49459 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
UBE2AP49459 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC9.56□□□□□ -0.88
UBE2AP49459 ZBED1P1-201ENST00000502364 1930 ntBASIC9.56□□□□□ -0.88
UBE2AP49459 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
UBE2AP49459 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC9.56□□□□□ -0.88
UBE2AP49459 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
UBE2AP49459 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
UBE2AP49459 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
UBE2AP49459 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
UBE2AP49459 ASB7-201ENST00000332783 4985 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
UBE2AP49459 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC9.56□□□□□ -0.88
UBE2AP49459 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC9.56□□□□□ -0.88
UBE2AP49459 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
UBE2AP49459 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC9.56□□□□□ -0.88
UBE2AP49459 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
UBE2AP49459 AC100757.3-201ENST00000622361 1406 ntBASIC9.56□□□□□ -0.88
UBE2AP49459 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC9.56□□□□□ -0.88
UBE2AP49459 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC9.56□□□□□ -0.88
UBE2AP49459 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
UBE2AP49459 SRRM4-201ENST00000267260 8477 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBE2AP49459 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBE2AP49459 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBE2AP49459 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC9.55□□□□□ -0.88
UBE2AP49459 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBE2AP49459 AC011481.3-201ENST00000623895 5594 ntBASIC9.55□□□□□ -0.88
UBE2AP49459 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC9.55□□□□□ -0.88
UBE2AP49459 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBE2AP49459 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC9.55□□□□□ -0.88
UBE2AP49459 AC012508.2-201ENST00000567613 1472 ntBASIC9.55□□□□□ -0.88
UBE2AP49459 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBE2AP49459 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
UBE2AP49459 RALGPS2-203ENST00000367634 7512 ntTSL 2 BASIC9.55□□□□□ -0.88
UBE2AP49459 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBE2AP49459 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBE2AP49459 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBE2AP49459 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBE2AP49459 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBE2AP49459 ADAM19-201ENST00000257527 6481 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBE2AP49459 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBE2AP49459 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBE2AP49459 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
UBE2AP49459 LBH-203ENST00000404397 543 ntTSL 4 BASIC9.55□□□□□ -0.88
UBE2AP49459 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC9.55□□□□□ -0.88
UBE2AP49459 AC074338.1-201ENST00000416825 156 ntBASIC9.55□□□□□ -0.88
UBE2AP49459 RAD18-204ENST00000418463 563 ntTSL 4 BASIC9.55□□□□□ -0.88
UBE2AP49459 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC9.55□□□□□ -0.88
UBE2AP49459 RAD18-205ENST00000421052 582 ntTSL 3 BASIC9.55□□□□□ -0.88
UBE2AP49459 GHSR-202ENST00000427970 912 ntBASIC9.55□□□□□ -0.88
UBE2AP49459 RPL13P2-201ENST00000440687 659 ntBASIC9.55□□□□□ -0.88
UBE2AP49459 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
UBE2AP49459 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC9.55□□□□□ -0.88
UBE2AP49459 AC036164.1-201ENST00000570544 333 ntBASIC9.55□□□□□ -0.88
UBE2AP49459 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC9.55□□□□□ -0.88
UBE2AP49459 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC9.55□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms