Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BRCC3P46736 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
BRCC3P46736 AL136295.7-201ENST00000619226 1200 ntBASIC15.79■□□□□ 0.12
BRCC3P46736 AL805961.1-203ENST00000641078 1258 ntBASIC15.79■□□□□ 0.12
BRCC3P46736 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.79■□□□□ 0.12
BRCC3P46736 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BRCC3P46736 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BRCC3P46736 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BRCC3P46736 TCAF2P1-201ENST00000291129 2421 ntBASIC15.79■□□□□ 0.12
BRCC3P46736 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.79■□□□□ 0.12
BRCC3P46736 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
BRCC3P46736 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
BRCC3P46736 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
BRCC3P46736 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
BRCC3P46736 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
BRCC3P46736 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
BRCC3P46736 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BRCC3P46736 AC023157.3-201ENST00000619086 2088 ntBASIC15.79■□□□□ 0.12
BRCC3P46736 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.79■□□□□ 0.12
BRCC3P46736 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
BRCC3P46736 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BRCC3P46736 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BRCC3P46736 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BRCC3P46736 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BRCC3P46736 FAM90A7P-201ENST00000382628 1395 ntBASIC15.78■□□□□ 0.12
BRCC3P46736 FAM90A23P-201ENST00000400136 1395 ntBASIC15.78■□□□□ 0.12
BRCC3P46736 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC15.78■□□□□ 0.12
BRCC3P46736 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
BRCC3P46736 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BRCC3P46736 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
BRCC3P46736 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
BRCC3P46736 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BRCC3P46736 MRPL37P1-201ENST00000592451 1337 ntBASIC15.78■□□□□ 0.12
BRCC3P46736 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BRCC3P46736 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.78■□□□□ 0.12
BRCC3P46736 CMC1-204ENST00000423894 549 ntTSL 2 BASIC15.78■□□□□ 0.12
BRCC3P46736 AL645933.1-201ENST00000440087 609 ntBASIC15.78■□□□□ 0.12
BRCC3P46736 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC15.78■□□□□ 0.12
BRCC3P46736 Z97180.1-201ENST00000445173 988 ntBASIC15.78■□□□□ 0.12
BRCC3P46736 AC125604.1-201ENST00000496255 707 ntBASIC15.78■□□□□ 0.12
BRCC3P46736 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC15.78■□□□□ 0.12
BRCC3P46736 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.78■□□□□ 0.12
BRCC3P46736 AC105129.2-201ENST00000559536 390 ntBASIC15.78■□□□□ 0.12
BRCC3P46736 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BRCC3P46736 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BRCC3P46736 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
BRCC3P46736 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.78■□□□□ 0.12
BRCC3P46736 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
BRCC3P46736 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.78■□□□□ 0.12
BRCC3P46736 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
BRCC3P46736 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BRCC3P46736 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.78■□□□□ 0.12
BRCC3P46736 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
BRCC3P46736 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BRCC3P46736 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
BRCC3P46736 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.78■□□□□ 0.12
BRCC3P46736 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
BRCC3P46736 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
BRCC3P46736 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.78■□□□□ 0.12
BRCC3P46736 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.78■□□□□ 0.12
BRCC3P46736 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
BRCC3P46736 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
BRCC3P46736 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
BRCC3P46736 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
BRCC3P46736 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.77■□□□□ 0.12
BRCC3P46736 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
BRCC3P46736 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
BRCC3P46736 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.77■□□□□ 0.12
BRCC3P46736 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
BRCC3P46736 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
BRCC3P46736 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.77■□□□□ 0.12
BRCC3P46736 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
BRCC3P46736 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
BRCC3P46736 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
BRCC3P46736 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
BRCC3P46736 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
BRCC3P46736 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.77■□□□□ 0.12
BRCC3P46736 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
BRCC3P46736 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
BRCC3P46736 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.77■□□□□ 0.12
BRCC3P46736 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
BRCC3P46736 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.77■□□□□ 0.12
BRCC3P46736 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
BRCC3P46736 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
BRCC3P46736 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
BRCC3P46736 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
BRCC3P46736 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC15.77■□□□□ 0.12
BRCC3P46736 IMP3P2-201ENST00000489760 475 ntBASIC15.77■□□□□ 0.12
BRCC3P46736 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
BRCC3P46736 AC245884.6-201ENST00000515672 1067 ntBASIC15.77■□□□□ 0.12
BRCC3P46736 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.77■□□□□ 0.12
BRCC3P46736 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC15.77■□□□□ 0.12
BRCC3P46736 AC009779.1-201ENST00000551138 283 ntBASIC15.77■□□□□ 0.12
BRCC3P46736 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.77■□□□□ 0.12
BRCC3P46736 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC15.77■□□□□ 0.12
BRCC3P46736 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.77■□□□□ 0.12
BRCC3P46736 AC009884.2-201ENST00000603110 324 ntBASIC15.77■□□□□ 0.12
BRCC3P46736 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.77■□□□□ 0.12
BRCC3P46736 AC126177.1-201ENST00000547829 2218 ntBASIC15.77■□□□□ 0.12
BRCC3P46736 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms