Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC18.65■□□□□ 0.58
COL15A1P39059 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL15A1P39059 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL15A1P39059 AL590440.2-201ENST00000641973 1595 ntBASIC18.65■□□□□ 0.58
COL15A1P39059 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.65■□□□□ 0.58
COL15A1P39059 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
COL15A1P39059 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
COL15A1P39059 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
COL15A1P39059 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
COL15A1P39059 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.64■□□□□ 0.58
COL15A1P39059 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC18.64■□□□□ 0.58
COL15A1P39059 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
COL15A1P39059 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC18.64■□□□□ 0.57
COL15A1P39059 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL15A1P39059 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
COL15A1P39059 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
COL15A1P39059 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC18.64■□□□□ 0.57
COL15A1P39059 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC18.64■□□□□ 0.57
COL15A1P39059 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COL15A1P39059 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
COL15A1P39059 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL15A1P39059 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC18.64■□□□□ 0.57
COL15A1P39059 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC18.64■□□□□ 0.57
COL15A1P39059 RPSAP15-201ENST00000448168 861 ntBASIC18.64■□□□□ 0.57
COL15A1P39059 CHCHD2P9-201ENST00000461726 456 ntBASIC18.64■□□□□ 0.57
COL15A1P39059 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COL15A1P39059 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC18.64■□□□□ 0.57
COL15A1P39059 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC18.64■□□□□ 0.57
COL15A1P39059 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC18.64■□□□□ 0.57
COL15A1P39059 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC18.64■□□□□ 0.57
COL15A1P39059 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
COL15A1P39059 AC009084.3-201ENST00000623356 437 ntBASIC18.64■□□□□ 0.57
COL15A1P39059 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL15A1P39059 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL15A1P39059 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
COL15A1P39059 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL15A1P39059 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
COL15A1P39059 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL15A1P39059 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
COL15A1P39059 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
COL15A1P39059 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
COL15A1P39059 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL15A1P39059 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.63■□□□□ 0.57
COL15A1P39059 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL15A1P39059 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.63■□□□□ 0.57
COL15A1P39059 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC18.63■□□□□ 0.57
COL15A1P39059 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
COL15A1P39059 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL15A1P39059 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL15A1P39059 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL15A1P39059 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL15A1P39059 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL15A1P39059 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
COL15A1P39059 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
COL15A1P39059 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL15A1P39059 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL15A1P39059 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC18.63■□□□□ 0.57
COL15A1P39059 KRT8P28-201ENST00000433288 1390 ntBASIC18.63■□□□□ 0.57
COL15A1P39059 LINC01101-201ENST00000622953 1884 ntBASIC18.63■□□□□ 0.57
COL15A1P39059 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
COL15A1P39059 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL15A1P39059 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC18.63■□□□□ 0.57
COL15A1P39059 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC18.63■□□□□ 0.57
COL15A1P39059 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC18.63■□□□□ 0.57
COL15A1P39059 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC18.63■□□□□ 0.57
COL15A1P39059 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC18.63■□□□□ 0.57
COL15A1P39059 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
COL15A1P39059 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL15A1P39059 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL15A1P39059 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL15A1P39059 BANF1P3-201ENST00000412556 261 ntBASIC18.63■□□□□ 0.57
COL15A1P39059 AL627422.1-201ENST00000434104 580 ntBASIC18.63■□□□□ 0.57
COL15A1P39059 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC18.63■□□□□ 0.57
COL15A1P39059 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL15A1P39059 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC18.63■□□□□ 0.57
COL15A1P39059 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
COL15A1P39059 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL15A1P39059 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC18.63■□□□□ 0.57
COL15A1P39059 MVK-217ENST00000639206 367 ntTSL 5 BASIC18.63■□□□□ 0.57
COL15A1P39059 MECR-202ENST00000373791 2416 ntTSL 2 BASIC18.63■□□□□ 0.57
COL15A1P39059 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL15A1P39059 AC025271.4-201ENST00000621477 1726 ntBASIC18.63■□□□□ 0.57
COL15A1P39059 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL15A1P39059 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL15A1P39059 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL15A1P39059 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL15A1P39059 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL15A1P39059 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL15A1P39059 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL15A1P39059 CYP51A1P3-201ENST00000400072 1428 ntBASIC18.63■□□□□ 0.57
COL15A1P39059 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
COL15A1P39059 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
COL15A1P39059 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL15A1P39059 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC18.62■□□□□ 0.57
COL15A1P39059 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
COL15A1P39059 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.62■□□□□ 0.57
COL15A1P39059 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL15A1P39059 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC18.62■□□□□ 0.57
COL15A1P39059 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COL15A1P39059 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms