Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HMGCLP35914 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCLP35914 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCLP35914 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCLP35914 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCLP35914 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.82□□□□□ -0.04
HMGCLP35914 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.82□□□□□ -0.04
HMGCLP35914 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCLP35914 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.82□□□□□ -0.04
HMGCLP35914 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.82□□□□□ -0.04
HMGCLP35914 YBX1P6-201ENST00000442962 1002 ntBASIC14.82□□□□□ -0.04
HMGCLP35914 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCLP35914 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.82□□□□□ -0.04
HMGCLP35914 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.82□□□□□ -0.04
HMGCLP35914 AL358472.3-201ENST00000608147 415 ntBASIC14.82□□□□□ -0.04
HMGCLP35914 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCLP35914 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
HMGCLP35914 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCLP35914 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCLP35914 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCLP35914 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCLP35914 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCLP35914 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HMGCLP35914 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.82□□□□□ -0.04
HMGCLP35914 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCLP35914 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.82□□□□□ -0.04
HMGCLP35914 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCLP35914 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCLP35914 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCLP35914 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCLP35914 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.82□□□□□ -0.04
HMGCLP35914 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
HMGCLP35914 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGCLP35914 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.81□□□□□ -0.04
HMGCLP35914 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGCLP35914 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.81□□□□□ -0.04
HMGCLP35914 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCLP35914 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCLP35914 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
HMGCLP35914 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
HMGCLP35914 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCLP35914 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCLP35914 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCLP35914 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
HMGCLP35914 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCLP35914 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
HMGCLP35914 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCLP35914 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
HMGCLP35914 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGCLP35914 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCLP35914 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCLP35914 AC139712.1-201ENST00000378256 1875 ntBASIC14.81□□□□□ -0.04
HMGCLP35914 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCLP35914 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
HMGCLP35914 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCLP35914 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCLP35914 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCLP35914 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCLP35914 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
HMGCLP35914 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.81□□□□□ -0.04
HMGCLP35914 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCLP35914 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
HMGCLP35914 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
HMGCLP35914 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.81□□□□□ -0.04
HMGCLP35914 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.81□□□□□ -0.04
HMGCLP35914 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCLP35914 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGCLP35914 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGCLP35914 RNA5SP412-201ENST00000516234 123 ntBASIC14.81□□□□□ -0.04
HMGCLP35914 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGCLP35914 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.81□□□□□ -0.04
HMGCLP35914 AC103988.2-201ENST00000561804 725 ntBASIC14.81□□□□□ -0.04
HMGCLP35914 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.81□□□□□ -0.04
HMGCLP35914 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.81□□□□□ -0.04
HMGCLP35914 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
HMGCLP35914 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
HMGCLP35914 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
HMGCLP35914 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
HMGCLP35914 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.81□□□□□ -0.04
HMGCLP35914 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
HMGCLP35914 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCLP35914 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCLP35914 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCLP35914 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGCLP35914 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCLP35914 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCLP35914 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGCLP35914 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.81□□□□□ -0.04
HMGCLP35914 AL590440.2-201ENST00000641973 1595 ntBASIC14.81□□□□□ -0.04
HMGCLP35914 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGCLP35914 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCLP35914 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.81□□□□□ -0.04
HMGCLP35914 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCLP35914 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCLP35914 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.8□□□□□ -0.04
HMGCLP35914 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCLP35914 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.8□□□□□ -0.04
HMGCLP35914 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.8□□□□□ -0.04
HMGCLP35914 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.8□□□□□ -0.04
HMGCLP35914 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms