Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CKS2P33552 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CKS2P33552 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC11.04□□□□□ -0.64
CKS2P33552 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CKS2P33552 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CKS2P33552 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC11.04□□□□□ -0.64
CKS2P33552 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
CKS2P33552 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CKS2P33552 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CKS2P33552 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CKS2P33552 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC11.04□□□□□ -0.64
CKS2P33552 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS2P33552 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
CKS2P33552 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS2P33552 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
CKS2P33552 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
CKS2P33552 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
CKS2P33552 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS2P33552 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS2P33552 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CKS2P33552 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS2P33552 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CKS2P33552 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC11.03□□□□□ -0.64
CKS2P33552 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
CKS2P33552 MX1-218ENST00000619682 1980 ntTSL 5 BASIC11.03□□□□□ -0.64
CKS2P33552 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
CKS2P33552 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CKS2P33552 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS2P33552 GRN-214ENST00000589265 1632 ntTSL 5 BASIC11.03□□□□□ -0.64
CKS2P33552 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS2P33552 INVS-201ENST00000262456 2968 ntTSL 5 BASIC11.03□□□□□ -0.64
CKS2P33552 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC11.03□□□□□ -0.64
CKS2P33552 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC11.03□□□□□ -0.64
CKS2P33552 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
CKS2P33552 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
CKS2P33552 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS2P33552 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS2P33552 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CKS2P33552 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC11.03□□□□□ -0.64
CKS2P33552 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CKS2P33552 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS2P33552 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC11.03□□□□□ -0.64
CKS2P33552 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
CKS2P33552 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC11.03□□□□□ -0.64
CKS2P33552 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC11.03□□□□□ -0.64
CKS2P33552 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS2P33552 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CKS2P33552 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC11.03□□□□□ -0.64
CKS2P33552 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC11.03□□□□□ -0.64
CKS2P33552 AC015910.1-201ENST00000579400 975 ntBASIC11.03□□□□□ -0.64
CKS2P33552 PRR29-207ENST00000580752 458 ntTSL 3 BASIC11.03□□□□□ -0.64
CKS2P33552 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CKS2P33552 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CKS2P33552 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC11.03□□□□□ -0.64
CKS2P33552 AC004877.2-201ENST00000623941 599 ntBASIC11.03□□□□□ -0.64
CKS2P33552 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
CKS2P33552 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS2P33552 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS2P33552 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CKS2P33552 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC11.03□□□□□ -0.64
CKS2P33552 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
CKS2P33552 NUTM2HP-201ENST00000442076 2498 ntBASIC11.03□□□□□ -0.64
CKS2P33552 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS2P33552 AC010336.1-201ENST00000539278 4739 ntBASIC11.03□□□□□ -0.64
CKS2P33552 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
CKS2P33552 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CKS2P33552 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC11.03□□□□□ -0.64
CKS2P33552 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS2P33552 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CKS2P33552 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS2P33552 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC11.03□□□□□ -0.64
CKS2P33552 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS2P33552 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
CKS2P33552 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
CKS2P33552 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS2P33552 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS2P33552 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS2P33552 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC11.03□□□□□ -0.64
CKS2P33552 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC11.03□□□□□ -0.64
CKS2P33552 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
CKS2P33552 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
CKS2P33552 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS2P33552 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
CKS2P33552 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
CKS2P33552 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS2P33552 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS2P33552 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS2P33552 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC11.03□□□□□ -0.64
CKS2P33552 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS2P33552 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS2P33552 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS2P33552 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CKS2P33552 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
CKS2P33552 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
CKS2P33552 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
CKS2P33552 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC11.02□□□□□ -0.64
CKS2P33552 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC11.02□□□□□ -0.64
CKS2P33552 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC11.02□□□□□ -0.64
CKS2P33552 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC11.02□□□□□ -0.64
CKS2P33552 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms