Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC18.12■□□□□ 0.49
TM4SF1P30408 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC18.12■□□□□ 0.49
TM4SF1P30408 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC18.12■□□□□ 0.49
TM4SF1P30408 RN7SL494P-201ENST00000461517 304 ntBASIC18.12■□□□□ 0.49
TM4SF1P30408 PGAM1P12-201ENST00000505622 748 ntBASIC18.12■□□□□ 0.49
TM4SF1P30408 FAM86KP-201ENST00000509817 987 ntBASIC18.12■□□□□ 0.49
TM4SF1P30408 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC18.12■□□□□ 0.49
TM4SF1P30408 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC18.12■□□□□ 0.49
TM4SF1P30408 DRG2-220ENST00000583355 891 ntTSL 3 BASIC18.12■□□□□ 0.49
TM4SF1P30408 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC18.12■□□□□ 0.49
TM4SF1P30408 HELLS-212ENST00000630929 400 ntTSL 5 BASIC18.12■□□□□ 0.49
TM4SF1P30408 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC18.12■□□□□ 0.49
TM4SF1P30408 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.12■□□□□ 0.49
TM4SF1P30408 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TM4SF1P30408 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TM4SF1P30408 FAM90A21P-201ENST00000510875 1396 ntBASIC18.12■□□□□ 0.49
TM4SF1P30408 FAM90A15P-201ENST00000514465 1395 ntBASIC18.12■□□□□ 0.49
TM4SF1P30408 FAM90A6P-201ENST00000515148 1394 ntBASIC18.12■□□□□ 0.49
TM4SF1P30408 FAM90A16P-201ENST00000526662 1395 ntBASIC18.12■□□□□ 0.49
TM4SF1P30408 FAM90A9P-201ENST00000527940 1395 ntBASIC18.12■□□□□ 0.49
TM4SF1P30408 FAM90A5P-201ENST00000528738 1395 ntBASIC18.12■□□□□ 0.49
TM4SF1P30408 FAM90A14P-201ENST00000530386 1395 ntBASIC18.12■□□□□ 0.49
TM4SF1P30408 FAM90A13P-201ENST00000534703 1395 ntBASIC18.12■□□□□ 0.49
TM4SF1P30408 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
TM4SF1P30408 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC18.12■□□□□ 0.49
TM4SF1P30408 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TM4SF1P30408 AC011270.2-201ENST00000624293 2550 ntBASIC18.12■□□□□ 0.49
TM4SF1P30408 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
TM4SF1P30408 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TM4SF1P30408 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TM4SF1P30408 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TM4SF1P30408 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TM4SF1P30408 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TM4SF1P30408 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC18.12■□□□□ 0.49
TM4SF1P30408 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TM4SF1P30408 ACE3P-201ENST00000423435 1973 ntBASIC18.11■□□□□ 0.49
TM4SF1P30408 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.11■□□□□ 0.49
TM4SF1P30408 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC18.11■□□□□ 0.49
TM4SF1P30408 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TM4SF1P30408 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TM4SF1P30408 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TM4SF1P30408 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TM4SF1P30408 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.11■□□□□ 0.49
TM4SF1P30408 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TM4SF1P30408 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC18.11■□□□□ 0.49
TM4SF1P30408 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TM4SF1P30408 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TM4SF1P30408 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC18.11■□□□□ 0.49
TM4SF1P30408 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC18.11■□□□□ 0.49
TM4SF1P30408 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC18.11■□□□□ 0.49
TM4SF1P30408 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TM4SF1P30408 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC18.11■□□□□ 0.49
TM4SF1P30408 RGS5-216ENST00000449680 788 ntTSL 3 BASIC18.11■□□□□ 0.49
TM4SF1P30408 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC18.11■□□□□ 0.49
TM4SF1P30408 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC18.11■□□□□ 0.49
TM4SF1P30408 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC18.11■□□□□ 0.49
TM4SF1P30408 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TM4SF1P30408 AC095040.1-201ENST00000513286 675 ntBASIC18.11■□□□□ 0.49
TM4SF1P30408 THY1-209ENST00000580275 578 ntTSL 3 BASIC18.11■□□□□ 0.49
TM4SF1P30408 EIF5AP2-201ENST00000585668 1047 ntBASIC18.11■□□□□ 0.49
TM4SF1P30408 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC18.11■□□□□ 0.49
TM4SF1P30408 SIGLEC22P-201ENST00000599104 714 ntBASIC18.11■□□□□ 0.49
TM4SF1P30408 AC090386.2-201ENST00000623010 1039 ntBASIC18.11■□□□□ 0.49
TM4SF1P30408 TEKT4P2-202ENST00000559466 1312 ntBASIC18.11■□□□□ 0.49
TM4SF1P30408 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC18.11■□□□□ 0.49
TM4SF1P30408 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC18.11■□□□□ 0.49
TM4SF1P30408 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC18.11■□□□□ 0.49
TM4SF1P30408 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TM4SF1P30408 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TM4SF1P30408 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TM4SF1P30408 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC18.11■□□□□ 0.49
TM4SF1P30408 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC18.11■□□□□ 0.49
TM4SF1P30408 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.11■□□□□ 0.49
TM4SF1P30408 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC18.11■□□□□ 0.49
TM4SF1P30408 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC18.11■□□□□ 0.49
TM4SF1P30408 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.11■□□□□ 0.49
TM4SF1P30408 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TM4SF1P30408 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC18.11■□□□□ 0.49
TM4SF1P30408 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
TM4SF1P30408 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TM4SF1P30408 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TM4SF1P30408 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.1■□□□□ 0.49
TM4SF1P30408 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TM4SF1P30408 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC18.1■□□□□ 0.49
TM4SF1P30408 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TM4SF1P30408 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TM4SF1P30408 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TM4SF1P30408 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC18.1■□□□□ 0.49
TM4SF1P30408 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TM4SF1P30408 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TM4SF1P30408 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TM4SF1P30408 PYY2-201ENST00000315776 282 ntBASIC18.1■□□□□ 0.49
TM4SF1P30408 COX20P1-201ENST00000366529 357 ntBASIC18.1■□□□□ 0.49
TM4SF1P30408 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
TM4SF1P30408 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC18.1■□□□□ 0.49
TM4SF1P30408 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC18.1■□□□□ 0.49
TM4SF1P30408 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC18.1■□□□□ 0.49
TM4SF1P30408 RN7SL23P-201ENST00000484055 275 ntBASIC18.1■□□□□ 0.49
TM4SF1P30408 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC18.1■□□□□ 0.49
TM4SF1P30408 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms