Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CD40P25942 E2F3P2-201ENST00000447755 1422 ntBASIC12.85□□□□□ -0.35
CD40P25942 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD40P25942 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CD40P25942 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
CD40P25942 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.85□□□□□ -0.35
CD40P25942 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.85□□□□□ -0.35
CD40P25942 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD40P25942 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.85□□□□□ -0.35
CD40P25942 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CD40P25942 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CD40P25942 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CD40P25942 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD40P25942 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC12.85□□□□□ -0.35
CD40P25942 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CD40P25942 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CD40P25942 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CD40P25942 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CD40P25942 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CD40P25942 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD40P25942 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD40P25942 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD40P25942 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD40P25942 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD40P25942 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD40P25942 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
CD40P25942 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD40P25942 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD40P25942 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD40P25942 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC12.84□□□□□ -0.35
CD40P25942 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CD40P25942 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CD40P25942 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
CD40P25942 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
CD40P25942 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD40P25942 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD40P25942 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC12.84□□□□□ -0.35
CD40P25942 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC12.84□□□□□ -0.35
CD40P25942 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD40P25942 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CD40P25942 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CD40P25942 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.84□□□□□ -0.35
CD40P25942 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CD40P25942 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.84□□□□□ -0.35
CD40P25942 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD40P25942 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC12.84□□□□□ -0.35
CD40P25942 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
CD40P25942 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CD40P25942 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
CD40P25942 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CD40P25942 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CD40P25942 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC12.84□□□□□ -0.35
CD40P25942 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC12.84□□□□□ -0.35
CD40P25942 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CD40P25942 BCYRN1-201ENST00000418539 200 ntBASIC12.84□□□□□ -0.35
CD40P25942 FAM58BP-201ENST00000439056 645 ntBASIC12.84□□□□□ -0.35
CD40P25942 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD40P25942 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CD40P25942 GCOM2-201ENST00000509133 1104 ntBASIC12.84□□□□□ -0.35
CD40P25942 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.84□□□□□ -0.35
CD40P25942 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD40P25942 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC12.84□□□□□ -0.35
CD40P25942 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC12.84□□□□□ -0.35
CD40P25942 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CD40P25942 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC12.84□□□□□ -0.35
CD40P25942 AL139099.5-201ENST00000635274 300 ntBASIC12.84□□□□□ -0.35
CD40P25942 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.84□□□□□ -0.35
CD40P25942 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CD40P25942 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD40P25942 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC12.84□□□□□ -0.35
CD40P25942 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD40P25942 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.84□□□□□ -0.35
CD40P25942 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD40P25942 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CD40P25942 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CD40P25942 FES-204ENST00000414248 2327 ntTSL 2 BASIC12.84□□□□□ -0.35
CD40P25942 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CD40P25942 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD40P25942 AGAP7P-201ENST00000582299 2062 ntBASIC12.84□□□□□ -0.35
CD40P25942 AGAP14-201ENST00000624701 2060 ntBASIC12.84□□□□□ -0.35
CD40P25942 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CD40P25942 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD40P25942 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
CD40P25942 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD40P25942 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD40P25942 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.35
CD40P25942 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC12.83□□□□□ -0.35
CD40P25942 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
CD40P25942 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CD40P25942 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC12.83□□□□□ -0.35
CD40P25942 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.83□□□□□ -0.35
CD40P25942 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CD40P25942 NID2-208ENST00000617139 3827 ntTSL 5 BASIC12.83□□□□□ -0.36
CD40P25942 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC12.83□□□□□ -0.36
CD40P25942 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.83□□□□□ -0.36
CD40P25942 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.83□□□□□ -0.36
CD40P25942 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC12.83□□□□□ -0.36
CD40P25942 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD40P25942 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CD40P25942 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms