Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ACKR3P25106 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
ACKR3P25106 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ACKR3P25106 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.03□□□□□ -0.32
ACKR3P25106 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ACKR3P25106 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
ACKR3P25106 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ACKR3P25106 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.03□□□□□ -0.32
ACKR3P25106 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ACKR3P25106 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
ACKR3P25106 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ACKR3P25106 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ACKR3P25106 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.03□□□□□ -0.32
ACKR3P25106 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ACKR3P25106 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.03□□□□□ -0.32
ACKR3P25106 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
ACKR3P25106 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
ACKR3P25106 SOCS2P1-201ENST00000417727 557 ntBASIC13.03□□□□□ -0.32
ACKR3P25106 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.03□□□□□ -0.32
ACKR3P25106 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.03□□□□□ -0.32
ACKR3P25106 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ACKR3P25106 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.03□□□□□ -0.32
ACKR3P25106 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.03□□□□□ -0.32
ACKR3P25106 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.03□□□□□ -0.32
ACKR3P25106 DUX4L47-201ENST00000566374 394 ntBASIC13.03□□□□□ -0.32
ACKR3P25106 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.03□□□□□ -0.32
ACKR3P25106 AC004233.3-201ENST00000607794 1269 ntBASIC13.03□□□□□ -0.32
ACKR3P25106 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ACKR3P25106 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ACKR3P25106 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
ACKR3P25106 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ACKR3P25106 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
ACKR3P25106 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ACKR3P25106 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ACKR3P25106 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ACKR3P25106 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ACKR3P25106 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
ACKR3P25106 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ACKR3P25106 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.03□□□□□ -0.32
ACKR3P25106 AL391825.1-201ENST00000457671 1364 ntBASIC13.03□□□□□ -0.32
ACKR3P25106 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ACKR3P25106 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ACKR3P25106 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ACKR3P25106 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
ACKR3P25106 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
ACKR3P25106 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ACKR3P25106 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.03□□□□□ -0.32
ACKR3P25106 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.03□□□□□ -0.32
ACKR3P25106 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ACKR3P25106 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ACKR3P25106 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ACKR3P25106 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ACKR3P25106 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ACKR3P25106 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ACKR3P25106 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
ACKR3P25106 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.03□□□□□ -0.32
ACKR3P25106 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ACKR3P25106 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ACKR3P25106 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ACKR3P25106 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
ACKR3P25106 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ACKR3P25106 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.02□□□□□ -0.32
ACKR3P25106 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.02□□□□□ -0.32
ACKR3P25106 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ACKR3P25106 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ACKR3P25106 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ACKR3P25106 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ACKR3P25106 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ACKR3P25106 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ACKR3P25106 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
ACKR3P25106 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
ACKR3P25106 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.02□□□□□ -0.33
ACKR3P25106 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.02□□□□□ -0.33
ACKR3P25106 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ACKR3P25106 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ACKR3P25106 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
ACKR3P25106 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ACKR3P25106 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
ACKR3P25106 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ACKR3P25106 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
ACKR3P25106 FAM207CP-201ENST00000443486 507 ntBASIC13.02□□□□□ -0.33
ACKR3P25106 BCRP1-201ENST00000444246 691 ntBASIC13.02□□□□□ -0.33
ACKR3P25106 MYCLP2-201ENST00000449268 967 ntBASIC13.02□□□□□ -0.33
ACKR3P25106 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.02□□□□□ -0.33
ACKR3P25106 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
ACKR3P25106 ELK1P1-201ENST00000485699 580 ntBASIC13.02□□□□□ -0.33
ACKR3P25106 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ACKR3P25106 API5-211ENST00000534695 560 ntTSL 5 BASIC13.02□□□□□ -0.33
ACKR3P25106 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.33
ACKR3P25106 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.02□□□□□ -0.33
ACKR3P25106 RN7SL204P-201ENST00000582831 262 ntBASIC13.02□□□□□ -0.33
ACKR3P25106 LINC02560-201ENST00000596379 459 ntBASIC13.02□□□□□ -0.33
ACKR3P25106 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.02□□□□□ -0.33
ACKR3P25106 TMEM261P1-201ENST00000604899 340 ntBASIC13.02□□□□□ -0.33
ACKR3P25106 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
ACKR3P25106 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ACKR3P25106 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ACKR3P25106 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.02□□□□□ -0.33
ACKR3P25106 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ACKR3P25106 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms