| MUC1 | P15941 | AP003068.1-201 | ENST00000528887 | 544 nt | TSL 4 BASIC | 12.88 | □□□□□ -0.35 | | |
| MUC1 | P15941 | AC013451.1-201 | ENST00000554552 | 518 nt | TSL 4 BASIC | 12.88 | □□□□□ -0.35 | | |
| MUC1 | P15941 | AC111170.2-201 | ENST00000585369 | 768 nt | TSL 3 BASIC | 12.88 | □□□□□ -0.35 | | |
| MUC1 | P15941 | WFDC1-204 | ENST00000613603 | 549 nt | BASIC | 12.88 | □□□□□ -0.35 | | |
| MUC1 | P15941 | ZNF890P-201 | ENST00000422060 | 1352 nt | TSL 2 BASIC | 12.88 | □□□□□ -0.35 | | |
| MUC1 | P15941 | AGER-206 | ENST00000375070 | 1463 nt | TSL 5 BASIC | 12.88 | □□□□□ -0.35 | | |
| MUC1 | P15941 | AGER-208 | ENST00000438221 | 1493 nt | TSL 1 (best) BASIC | 12.88 | □□□□□ -0.35 | | |
| MUC1 | P15941 | ZSWIM8-AS1-201 | ENST00000456638 | 1460 nt | TSL 1 (best) BASIC | 12.88 | □□□□□ -0.35 | | |
| MUC1 | P15941 | EPB41L3-201 | ENST00000341928 | 4706 nt | APPRIS P3 TSL 1 (best) BASIC | 12.88 | □□□□□ -0.35 | | |
| MUC1 | P15941 | TRIM50-202 | ENST00000453152 | 1599 nt | APPRIS P1 TSL 2 BASIC | 12.88 | □□□□□ -0.35 | | |
| MUC1 | P15941 | AC007787.1-201 | ENST00000588095 | 1583 nt | BASIC | 12.88 | □□□□□ -0.35 | | |
| MUC1 | P15941 | THEMIS2-203 | ENST00000373925 | 1650 nt | TSL 1 (best) BASIC | 12.88 | □□□□□ -0.35 | | |
| MUC1 | P15941 | TCP11-206 | ENST00000412155 | 1690 nt | APPRIS ALT2 TSL 2 BASIC | 12.88 | □□□□□ -0.35 | | |
| MUC1 | P15941 | RNF166-210 | ENST00000568683 | 1768 nt | TSL 3 BASIC | 12.88 | □□□□□ -0.35 | | |
| MUC1 | P15941 | TOM1L1-201 | ENST00000348161 | 1895 nt | TSL 2 BASIC | 12.88 | □□□□□ -0.35 | | |
| MUC1 | P15941 | AC011462.1-202 | ENST00000540732 | 1960 nt | APPRIS P1 TSL 2 BASIC | 12.88 | □□□□□ -0.35 | | |
| MUC1 | P15941 | LINC00116-201 | ENST00000414416 | 2051 nt | APPRIS P5 TSL 1 (best) BASIC | 12.88 | □□□□□ -0.35 | | |
| MUC1 | P15941 | TMEM115-201 | ENST00000266025 | 2197 nt | APPRIS P1 TSL 1 (best) BASIC | 12.88 | □□□□□ -0.35 | | |
| MUC1 | P15941 | HNRNPH1-203 | ENST00000393432 | 2279 nt | APPRIS P1 TSL 1 (best) BASIC | 12.88 | □□□□□ -0.35 | | |
| MUC1 | P15941 | SIGLEC5-201 | ENST00000534261 | 2360 nt | APPRIS P1 TSL 5 BASIC | 12.88 | □□□□□ -0.35 | | |
| MUC1 | P15941 | ALDH3B1-201 | ENST00000342456 | 2786 nt | APPRIS P1 TSL 1 (best) BASIC | 12.88 | □□□□□ -0.35 | | |
| MUC1 | P15941 | AL590132.1-202 | ENST00000638983 | 4184 nt | TSL 5 BASIC | 12.88 | □□□□□ -0.35 | | |
| MUC1 | P15941 | MPP6-201 | ENST00000222644 | 8452 nt | APPRIS P1 TSL 1 (best) BASIC | 12.88 | □□□□□ -0.35 | | |
| MUC1 | P15941 | ARMCX4-202 | ENST00000423738 | 7424 nt | APPRIS P1 TSL 5 BASIC | 12.88 | □□□□□ -0.35 | | |
| MUC1 | P15941 | CEP164-201 | ENST00000278935 | 5630 nt | APPRIS P2 TSL 1 (best) BASIC | 12.88 | □□□□□ -0.35 | | |
| MUC1 | P15941 | ADAMTS13-205 | ENST00000371916 | 4330 nt | TSL 5 BASIC | 12.88 | □□□□□ -0.35 | | |
| MUC1 | P15941 | DNMT3B-204 | ENST00000353855 | 4237 nt | TSL 5 BASIC | 12.88 | □□□□□ -0.35 | | |
| MUC1 | P15941 | OPA1-203 | ENST00000361715 | 6384 nt | TSL 5 BASIC | 12.88 | □□□□□ -0.35 | | |
| MUC1 | P15941 | ILF2-205 | ENST00000615950 | 1906 nt | TSL 2 BASIC | 12.88 | □□□□□ -0.35 | | |
| MUC1 | P15941 | MAGEA9-201 | ENST00000243314 | 1814 nt | APPRIS P1 TSL 1 (best) BASIC | 12.88 | □□□□□ -0.35 | | |
| MUC1 | P15941 | NSUN5P1-206 | ENST00000457988 | 1836 nt | TSL 2 BASIC | 12.88 | □□□□□ -0.35 | | |
| MUC1 | P15941 | MPDU1-201 | ENST00000250124 | 1601 nt | APPRIS P1 TSL 1 (best) BASIC | 12.88 | □□□□□ -0.35 | | |
| MUC1 | P15941 | CTSB-220 | ENST00000531089 | 1436 nt | APPRIS P1 TSL 5 BASIC | 12.88 | □□□□□ -0.35 | | |
| MUC1 | P15941 | SH3BP5L-201 | ENST00000366472 | 3861 nt | APPRIS P1 TSL 1 (best) BASIC | 12.88 | □□□□□ -0.35 | | |
| MUC1 | P15941 | NFATC2-203 | ENST00000414705 | 2974 nt | APPRIS ALT2 TSL 1 (best) BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | AL031728.1-201 | ENST00000449034 | 2479 nt | TSL 3 BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | SACM1L-201 | ENST00000389061 | 3723 nt | APPRIS P1 TSL 1 (best) BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | NTN4-201 | ENST00000343702 | 3615 nt | APPRIS P1 TSL 1 (best) BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | ZNF79-201 | ENST00000342483 | 2078 nt | APPRIS P1 TSL 1 (best) BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | FAM230B-201 | ENST00000415376 | 1859 nt | TSL 2 BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | AC008079.1-201 | ENST00000434390 | 1859 nt | TSL 5 BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | SGK3-211 | ENST00000522398 | 3106 nt | APPRIS P1 TSL 5 BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | ADAMTS2-201 | ENST00000251582 | 6754 nt | APPRIS P1 TSL 1 (best) BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | GAS2L2-202 | ENST00000604641 | 3014 nt | APPRIS P2 TSL 1 (best) BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | PLA1A-201 | ENST00000273371 | 1786 nt | APPRIS P1 TSL 1 (best) BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | PROM2-203 | ENST00000403131 | 2922 nt | APPRIS P1 TSL 1 (best) BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | LINC00475-202 | ENST00000416438 | 2506 nt | TSL 2 BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | SLAIN1-216 | ENST00000488699 | 1461 nt | TSL 2 BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | APLP2-203 | ENST00000338167 | 3270 nt | APPRIS ALT2 TSL 1 (best) BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | PMM2-201 | ENST00000268261 | 2313 nt | APPRIS P1 TSL 1 (best) BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | APOA1-201 | ENST00000236850 | 1227 nt | APPRIS P1 TSL 1 (best) BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | FOXR1-201 | ENST00000317011 | 1159 nt | APPRIS P1 TSL 1 (best) BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | ACKR1-201 | ENST00000368121 | 1240 nt | BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | KIAA0907-201 | ENST00000368319 | 1155 nt | TSL 1 (best) BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | FANK1-204 | ENST00000368695 | 1296 nt | TSL 1 (best) BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | APOA1-205 | ENST00000375329 | 927 nt | TSL 2 BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | IGHV3-16-201 | ENST00000390604 | 425 nt | APPRIS P1 BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | DHDDS-206 | ENST00000427245 | 868 nt | TSL 5 BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | DSN1-207 | ENST00000448110 | 2129 nt | APPRIS ALT2 TSL 2 BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | MRNIP-220 | ENST00000523084 | 1096 nt | TSL 1 (best) BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | ST8SIA2-202 | ENST00000539113 | 1089 nt | TSL 1 (best) BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | C17orf49-209 | ENST00000552775 | 779 nt | TSL 5 BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | AC105339.1-202 | ENST00000559535 | 1283 nt | TSL 5 BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | CARHSP1-203 | ENST00000561530 | 729 nt | APPRIS P1 TSL 3 BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | WASH4P-201 | ENST00000564273 | 1246 nt | BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | MRPS23-202 | ENST00000578444 | 580 nt | TSL 2 BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | APOBEC3H-206 | ENST00000613677 | 730 nt | APPRIS ALT2 TSL 5 BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | AC006449.3-201 | ENST00000620144 | 563 nt | TSL 4 BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | CU634019.7-201 | ENST00000624153 | 1185 nt | BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | FP236241.2-201 | ENST00000624906 | 1185 nt | BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | DCUN1D3-201 | ENST00000324344 | 6162 nt | APPRIS P1 TSL 1 (best) BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | TRAK1-203 | ENST00000396175 | 5033 nt | APPRIS ALT2 TSL 5 BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | CFAP52-202 | ENST00000396219 | 1912 nt | TSL 2 BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | PRMT2-207 | ENST00000440086 | 1932 nt | TSL 1 (best) BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | DFNA5-201 | ENST00000342947 | 2590 nt | APPRIS P1 TSL 1 (best) BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | AC018755.2-201 | ENST00000599649 | 1837 nt | APPRIS P1 TSL 1 (best) BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | USP47-207 | ENST00000527733 | 4525 nt | APPRIS P3 TSL 1 (best) BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | LARGE1-201 | ENST00000354992 | 4409 nt | APPRIS P1 TSL 1 (best) BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | MAMLD1-203 | ENST00000370401 | 4854 nt | APPRIS P3 TSL 5 BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | RPS9-205 | ENST00000402367 | 1617 nt | TSL 3 BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | ZNF782-205 | ENST00000481138 | 4213 nt | APPRIS P1 TSL 1 (best) BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | RNPS1-216 | ENST00000565678 | 2298 nt | APPRIS P1 TSL 1 (best) BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | RIOK1-202 | ENST00000379834 | 2810 nt | APPRIS P1 TSL 1 (best) BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | OSBP2-209 | ENST00000438716 | 2747 nt | APPRIS ALT2 TSL 2 BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | GLUL-203 | ENST00000339526 | 3942 nt | APPRIS P1 TSL 1 (best) BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | CDH16-209 | ENST00000570262 | 2604 nt | TSL 5 BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | PPP5D1-201 | ENST00000414155 | 1882 nt | APPRIS P5 TSL 2 BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | ADRB2-201 | ENST00000305988 | 3443 nt | APPRIS P1 BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | MPZL1-203 | ENST00000392121 | 3421 nt | TSL 2 BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | SEZ6L-202 | ENST00000343706 | 2898 nt | TSL 1 (best) BASIC | 12.87 | □□□□□ -0.35 | | |
| MUC1 | P15941 | TRPV4-202 | ENST00000418703 | 3247 nt | APPRIS P1 TSL 1 (best) BASIC | 12.86 | □□□□□ -0.35 | | |
| MUC1 | P15941 | LAP3-201 | ENST00000226299 | 2213 nt | APPRIS P1 TSL 1 (best) BASIC | 12.86 | □□□□□ -0.35 | | |
| MUC1 | P15941 | SNUPN-206 | ENST00000564675 | 1682 nt | APPRIS P1 TSL 5 BASIC | 12.86 | □□□□□ -0.35 | | |
| MUC1 | P15941 | NRROS-201 | ENST00000328557 | 2564 nt | APPRIS P1 TSL 1 (best) BASIC | 12.86 | □□□□□ -0.35 | | |
| MUC1 | P15941 | DNAJC3-AS1-201 | ENST00000499499 | 2908 nt | TSL 1 (best) BASIC | 12.86 | □□□□□ -0.35 | | |
| MUC1 | P15941 | ITPRIPL2-201 | ENST00000381440 | 7247 nt | APPRIS P1 BASIC | 12.86 | □□□□□ -0.35 | | |
| MUC1 | P15941 | POLR2E-213 | ENST00000615234 | 2831 nt | APPRIS P1 TSL 1 (best) BASIC | 12.86 | □□□□□ -0.35 | | |
| MUC1 | P15941 | TKT-201 | ENST00000296289 | 1931 nt | TSL 5 BASIC | 12.86 | □□□□□ -0.35 | | |
| MUC1 | P15941 | ACTL6A-202 | ENST00000429709 | 1901 nt | APPRIS P1 TSL 1 (best) BASIC | 12.86 | □□□□□ -0.35 | | |
| MUC1 | P15941 | CNTFR-204 | ENST00000610543 | 1926 nt | APPRIS P1 TSL 5 BASIC | 12.86 | □□□□□ -0.35 | | |