Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCF4P15884 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCF4P15884 CICP16-201ENST00000502609 2813 ntBASIC15.54■□□□□ 0.08
TCF4P15884 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TCF4P15884 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TCF4P15884 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.54■□□□□ 0.08
TCF4P15884 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TCF4P15884 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCF4P15884 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
TCF4P15884 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TCF4P15884 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCF4P15884 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCF4P15884 AC136759.1-202ENST00000530858 2194 ntBASIC15.54■□□□□ 0.08
TCF4P15884 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TCF4P15884 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCF4P15884 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TCF4P15884 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCF4P15884 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCF4P15884 TLE1P1-201ENST00000422965 589 ntBASIC15.54■□□□□ 0.08
TCF4P15884 MESTP3-201ENST00000503460 968 ntBASIC15.54■□□□□ 0.08
TCF4P15884 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCF4P15884 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.54■□□□□ 0.08
TCF4P15884 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.54■□□□□ 0.08
TCF4P15884 AL596325.1-201ENST00000563991 1082 ntBASIC15.54■□□□□ 0.08
TCF4P15884 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.54■□□□□ 0.08
TCF4P15884 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TCF4P15884 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TCF4P15884 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
TCF4P15884 AC008735.3-201ENST00000596646 500 ntBASIC15.54■□□□□ 0.08
TCF4P15884 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.54■□□□□ 0.08
TCF4P15884 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TCF4P15884 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.54■□□□□ 0.08
TCF4P15884 ECM1P1-201ENST00000604092 1279 ntBASIC15.54■□□□□ 0.08
TCF4P15884 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TCF4P15884 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.54■□□□□ 0.08
TCF4P15884 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCF4P15884 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCF4P15884 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCF4P15884 AC092135.3-201ENST00000624151 1846 ntBASIC15.54■□□□□ 0.08
TCF4P15884 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TCF4P15884 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TCF4P15884 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.54■□□□□ 0.08
TCF4P15884 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCF4P15884 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TCF4P15884 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TCF4P15884 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCF4P15884 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCF4P15884 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCF4P15884 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.53■□□□□ 0.08
TCF4P15884 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCF4P15884 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TCF4P15884 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCF4P15884 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TCF4P15884 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.53■□□□□ 0.08
TCF4P15884 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCF4P15884 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCF4P15884 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.53■□□□□ 0.08
TCF4P15884 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.53■□□□□ 0.08
TCF4P15884 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TCF4P15884 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCF4P15884 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TCF4P15884 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCF4P15884 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCF4P15884 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.53■□□□□ 0.08
TCF4P15884 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.53■□□□□ 0.08
TCF4P15884 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.53■□□□□ 0.08
TCF4P15884 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TCF4P15884 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCF4P15884 AC092933.1-201ENST00000393644 945 ntBASIC15.53■□□□□ 0.08
TCF4P15884 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCF4P15884 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.53■□□□□ 0.08
TCF4P15884 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.53■□□□□ 0.08
TCF4P15884 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TCF4P15884 BCRP2-202ENST00000447763 634 ntBASIC15.53■□□□□ 0.08
TCF4P15884 GCOM2-201ENST00000509133 1104 ntBASIC15.53■□□□□ 0.08
TCF4P15884 BCRP6-201ENST00000510112 632 ntBASIC15.53■□□□□ 0.08
TCF4P15884 BCRP7-201ENST00000511549 544 ntBASIC15.53■□□□□ 0.08
TCF4P15884 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TCF4P15884 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.53■□□□□ 0.08
TCF4P15884 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.53■□□□□ 0.08
TCF4P15884 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.53■□□□□ 0.08
TCF4P15884 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TCF4P15884 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.53■□□□□ 0.08
TCF4P15884 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.53■□□□□ 0.08
TCF4P15884 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCF4P15884 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.53■□□□□ 0.08
TCF4P15884 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.53■□□□□ 0.08
TCF4P15884 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TCF4P15884 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.53■□□□□ 0.08
TCF4P15884 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCF4P15884 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.53■□□□□ 0.08
TCF4P15884 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.53■□□□□ 0.08
TCF4P15884 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.53■□□□□ 0.08
TCF4P15884 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCF4P15884 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCF4P15884 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCF4P15884 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.53■□□□□ 0.08
TCF4P15884 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TCF4P15884 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TCF4P15884 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms