Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DOBP13765 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DOBP13765 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DOBP13765 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DOBP13765 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
HLA-DOBP13765 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.41□□□□□ -0.26
HLA-DOBP13765 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DOBP13765 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.41□□□□□ -0.26
HLA-DOBP13765 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.41□□□□□ -0.26
HLA-DOBP13765 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.41□□□□□ -0.26
HLA-DOBP13765 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.41□□□□□ -0.26
HLA-DOBP13765 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DOBP13765 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.41□□□□□ -0.26
HLA-DOBP13765 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.41□□□□□ -0.26
HLA-DOBP13765 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.41□□□□□ -0.26
HLA-DOBP13765 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DOBP13765 AP001889.1-201ENST00000525414 633 ntBASIC13.41□□□□□ -0.26
HLA-DOBP13765 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.41□□□□□ -0.26
HLA-DOBP13765 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.41□□□□□ -0.26
HLA-DOBP13765 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.41□□□□□ -0.26
HLA-DOBP13765 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DOBP13765 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.41□□□□□ -0.26
HLA-DOBP13765 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.41□□□□□ -0.26
HLA-DOBP13765 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
HLA-DOBP13765 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DOBP13765 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.41□□□□□ -0.26
HLA-DOBP13765 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
HLA-DOBP13765 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.41□□□□□ -0.26
HLA-DOBP13765 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
HLA-DOBP13765 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DOBP13765 AL354702.1-201ENST00000442006 1960 ntBASIC13.41□□□□□ -0.26
HLA-DOBP13765 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.41□□□□□ -0.26
HLA-DOBP13765 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DOBP13765 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DOBP13765 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
HLA-DOBP13765 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.41□□□□□ -0.26
HLA-DOBP13765 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DOBP13765 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DOBP13765 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DOBP13765 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.41□□□□□ -0.26
HLA-DOBP13765 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.41□□□□□ -0.26
HLA-DOBP13765 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLA-DOBP13765 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.41□□□□□ -0.26
HLA-DOBP13765 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DOBP13765 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.4□□□□□ -0.26
HLA-DOBP13765 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DOBP13765 AL138709.1-201ENST00000614840 1693 ntBASIC13.4□□□□□ -0.26
HLA-DOBP13765 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DOBP13765 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DOBP13765 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DOBP13765 SALL4P5-201ENST00000419001 1760 ntBASIC13.4□□□□□ -0.26
HLA-DOBP13765 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DOBP13765 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DOBP13765 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DOBP13765 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.4□□□□□ -0.26
HLA-DOBP13765 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.4□□□□□ -0.26
HLA-DOBP13765 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DOBP13765 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DOBP13765 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DOBP13765 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DOBP13765 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DOBP13765 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DOBP13765 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DOBP13765 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
HLA-DOBP13765 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
HLA-DOBP13765 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DOBP13765 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DOBP13765 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DOBP13765 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.4□□□□□ -0.26
HLA-DOBP13765 AC007389.4-201ENST00000454674 793 ntBASIC13.4□□□□□ -0.26
HLA-DOBP13765 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.4□□□□□ -0.26
HLA-DOBP13765 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DOBP13765 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
HLA-DOBP13765 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.4□□□□□ -0.26
HLA-DOBP13765 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.4□□□□□ -0.26
HLA-DOBP13765 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.4□□□□□ -0.26
HLA-DOBP13765 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
HLA-DOBP13765 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.4□□□□□ -0.26
HLA-DOBP13765 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DOBP13765 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DOBP13765 BX640514.1-201ENST00000583223 1918 ntBASIC13.4□□□□□ -0.26
HLA-DOBP13765 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DOBP13765 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DOBP13765 AC003102.2-201ENST00000589195 1469 ntBASIC13.4□□□□□ -0.26
HLA-DOBP13765 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DOBP13765 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
HLA-DOBP13765 AC005089.1-201ENST00000619486 2241 ntBASIC13.4□□□□□ -0.26
HLA-DOBP13765 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.4□□□□□ -0.26
HLA-DOBP13765 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DOBP13765 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DOBP13765 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HLA-DOBP13765 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.4□□□□□ -0.27
HLA-DOBP13765 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.4□□□□□ -0.27
HLA-DOBP13765 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
HLA-DOBP13765 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DOBP13765 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.39□□□□□ -0.27
HLA-DOBP13765 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.39□□□□□ -0.27
HLA-DOBP13765 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
HLA-DOBP13765 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DOBP13765 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms