Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA4P12838 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA4P12838 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
DEFA4P12838 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA4P12838 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
DEFA4P12838 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
DEFA4P12838 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.24□□□□□ -0.45
DEFA4P12838 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA4P12838 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
DEFA4P12838 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA4P12838 LBH-203ENST00000404397 543 ntTSL 4 BASIC12.24□□□□□ -0.45
DEFA4P12838 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.24□□□□□ -0.45
DEFA4P12838 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC12.24□□□□□ -0.45
DEFA4P12838 AC074338.1-201ENST00000416825 156 ntBASIC12.24□□□□□ -0.45
DEFA4P12838 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.24□□□□□ -0.45
DEFA4P12838 AC241585.1-201ENST00000433527 519 ntBASIC12.24□□□□□ -0.45
DEFA4P12838 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.24□□□□□ -0.45
DEFA4P12838 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC12.24□□□□□ -0.45
DEFA4P12838 HSPA7-201ENST00000445535 1927 ntBASIC12.24□□□□□ -0.45
DEFA4P12838 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.24□□□□□ -0.45
DEFA4P12838 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.24□□□□□ -0.45
DEFA4P12838 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA4P12838 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.24□□□□□ -0.45
DEFA4P12838 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA4P12838 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC12.24□□□□□ -0.45
DEFA4P12838 AC097493.3-201ENST00000509725 367 ntBASIC12.24□□□□□ -0.45
DEFA4P12838 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.24□□□□□ -0.45
DEFA4P12838 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
DEFA4P12838 AC138969.3-201ENST00000546612 1459 ntBASIC12.24□□□□□ -0.45
DEFA4P12838 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
DEFA4P12838 AC138932.2-201ENST00000548268 1459 ntBASIC12.24□□□□□ -0.45
DEFA4P12838 AC126755.4-201ENST00000549796 1459 ntBASIC12.24□□□□□ -0.45
DEFA4P12838 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
DEFA4P12838 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC12.24□□□□□ -0.45
DEFA4P12838 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC12.24□□□□□ -0.45
DEFA4P12838 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.24□□□□□ -0.45
DEFA4P12838 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA4P12838 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
DEFA4P12838 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC12.24□□□□□ -0.45
DEFA4P12838 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
DEFA4P12838 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA4P12838 AC100757.3-201ENST00000622361 1406 ntBASIC12.24□□□□□ -0.45
DEFA4P12838 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
DEFA4P12838 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.24□□□□□ -0.45
DEFA4P12838 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA4P12838 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA4P12838 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.24□□□□□ -0.45
DEFA4P12838 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA4P12838 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA4P12838 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
DEFA4P12838 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
DEFA4P12838 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.24□□□□□ -0.45
DEFA4P12838 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA4P12838 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
DEFA4P12838 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA4P12838 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.23□□□□□ -0.45
DEFA4P12838 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA4P12838 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA4P12838 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA4P12838 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
DEFA4P12838 AP000845.1-201ENST00000581677 2131 ntBASIC12.23□□□□□ -0.45
DEFA4P12838 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA4P12838 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA4P12838 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA4P12838 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
DEFA4P12838 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.23□□□□□ -0.45
DEFA4P12838 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.23□□□□□ -0.45
DEFA4P12838 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA4P12838 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA4P12838 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.23□□□□□ -0.45
DEFA4P12838 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA4P12838 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.23□□□□□ -0.45
DEFA4P12838 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.23□□□□□ -0.45
DEFA4P12838 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.23□□□□□ -0.45
DEFA4P12838 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA4P12838 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
DEFA4P12838 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA4P12838 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA4P12838 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA4P12838 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC12.23□□□□□ -0.45
DEFA4P12838 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA4P12838 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA4P12838 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA4P12838 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
DEFA4P12838 VMA21-202ENST00000370361 693 ntTSL 5 BASIC12.23□□□□□ -0.45
DEFA4P12838 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
DEFA4P12838 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC12.23□□□□□ -0.45
DEFA4P12838 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.23□□□□□ -0.45
DEFA4P12838 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.23□□□□□ -0.45
DEFA4P12838 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.23□□□□□ -0.45
DEFA4P12838 KRT18P64-201ENST00000434946 1219 ntBASIC12.23□□□□□ -0.45
DEFA4P12838 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA4P12838 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC12.23□□□□□ -0.45
DEFA4P12838 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
DEFA4P12838 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC12.23□□□□□ -0.45
DEFA4P12838 AC044860.1-202ENST00000559481 777 ntBASIC12.23□□□□□ -0.45
DEFA4P12838 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.23□□□□□ -0.45
DEFA4P12838 SSH2-210ENST00000582084 560 ntTSL 3 BASIC12.23□□□□□ -0.45
DEFA4P12838 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC12.23□□□□□ -0.45
DEFA4P12838 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms