Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC104596.2-201ENST00000512793 793 ntBASIC14.79□□□□□ -0.04
COL6A2P12110 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.79□□□□□ -0.04
COL6A2P12110 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL6A2P12110 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL6A2P12110 AC011840.2-201ENST00000563063 1520 ntBASIC14.79□□□□□ -0.04
COL6A2P12110 SPDYE22P-201ENST00000582158 798 ntBASIC14.79□□□□□ -0.04
COL6A2P12110 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.79□□□□□ -0.04
COL6A2P12110 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
COL6A2P12110 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.79□□□□□ -0.04
COL6A2P12110 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
COL6A2P12110 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.79□□□□□ -0.04
COL6A2P12110 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL6A2P12110 CICP8-201ENST00000455800 2813 ntBASIC14.79□□□□□ -0.04
COL6A2P12110 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
COL6A2P12110 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL6A2P12110 AL356585.2-201ENST00000625078 2396 ntBASIC14.78□□□□□ -0.04
COL6A2P12110 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL6A2P12110 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL6A2P12110 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
COL6A2P12110 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.78□□□□□ -0.04
COL6A2P12110 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.78□□□□□ -0.04
COL6A2P12110 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
COL6A2P12110 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL6A2P12110 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.78□□□□□ -0.04
COL6A2P12110 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL6A2P12110 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.78□□□□□ -0.04
COL6A2P12110 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL6A2P12110 AC003102.2-201ENST00000589195 1469 ntBASIC14.78□□□□□ -0.04
COL6A2P12110 AC020910.6-201ENST00000623084 1459 ntBASIC14.78□□□□□ -0.04
COL6A2P12110 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL6A2P12110 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL6A2P12110 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL6A2P12110 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL6A2P12110 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL6A2P12110 KRT18P28-201ENST00000453838 1332 ntBASIC14.78□□□□□ -0.04
COL6A2P12110 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
COL6A2P12110 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL6A2P12110 SPDYE19P-201ENST00000338590 713 ntBASIC14.78□□□□□ -0.04
COL6A2P12110 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.78□□□□□ -0.04
COL6A2P12110 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.78□□□□□ -0.04
COL6A2P12110 C1QBPP1-201ENST00000400117 770 ntBASIC14.78□□□□□ -0.04
COL6A2P12110 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.78□□□□□ -0.04
COL6A2P12110 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.78□□□□□ -0.04
COL6A2P12110 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
COL6A2P12110 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.78□□□□□ -0.04
COL6A2P12110 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.78□□□□□ -0.04
COL6A2P12110 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.78□□□□□ -0.04
COL6A2P12110 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.78□□□□□ -0.04
COL6A2P12110 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL6A2P12110 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.78□□□□□ -0.04
COL6A2P12110 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.78□□□□□ -0.04
COL6A2P12110 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.78□□□□□ -0.04
COL6A2P12110 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.78□□□□□ -0.04
COL6A2P12110 AC004790.1-201ENST00000612686 536 ntBASIC14.78□□□□□ -0.04
COL6A2P12110 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.78□□□□□ -0.04
COL6A2P12110 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.78□□□□□ -0.04
COL6A2P12110 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
COL6A2P12110 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL6A2P12110 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
COL6A2P12110 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL6A2P12110 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.78□□□□□ -0.04
COL6A2P12110 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL6A2P12110 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.78□□□□□ -0.04
COL6A2P12110 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL6A2P12110 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
COL6A2P12110 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL6A2P12110 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
COL6A2P12110 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
COL6A2P12110 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
COL6A2P12110 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL6A2P12110 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL6A2P12110 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL6A2P12110 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.78□□□□□ -0.04
COL6A2P12110 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL6A2P12110 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL6A2P12110 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL6A2P12110 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
COL6A2P12110 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.04
COL6A2P12110 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.77□□□□□ -0.04
COL6A2P12110 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
COL6A2P12110 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
COL6A2P12110 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
COL6A2P12110 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
COL6A2P12110 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
COL6A2P12110 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.77□□□□□ -0.04
COL6A2P12110 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
COL6A2P12110 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.77□□□□□ -0.04
COL6A2P12110 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
COL6A2P12110 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.77□□□□□ -0.04
COL6A2P12110 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.77□□□□□ -0.04
COL6A2P12110 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
COL6A2P12110 RNU1-114P-201ENST00000365297 166 ntBASIC14.77□□□□□ -0.05
COL6A2P12110 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
COL6A2P12110 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
COL6A2P12110 MRPS18AP1-201ENST00000414458 589 ntBASIC14.77□□□□□ -0.05
COL6A2P12110 KLF2P2-201ENST00000416807 1039 ntBASIC14.77□□□□□ -0.05
COL6A2P12110 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.77□□□□□ -0.05
COL6A2P12110 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.77□□□□□ -0.05
COL6A2P12110 AC093004.1-201ENST00000508850 424 ntBASIC14.77□□□□□ -0.05
COL6A2P12110 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms