Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC25.24■■□□□ 1.63
TOP2AP11388 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC25.24■■□□□ 1.63
TOP2AP11388 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC25.24■■□□□ 1.63
TOP2AP11388 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC25.24■■□□□ 1.63
TOP2AP11388 AGAP7P-201ENST00000582299 2062 ntBASIC25.24■■□□□ 1.63
TOP2AP11388 AGAP14-201ENST00000624701 2060 ntBASIC25.24■■□□□ 1.63
TOP2AP11388 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC25.24■■□□□ 1.63
TOP2AP11388 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC25.24■■□□□ 1.63
TOP2AP11388 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
TOP2AP11388 KRT8P43-201ENST00000406052 1458 ntBASIC25.24■■□□□ 1.63
TOP2AP11388 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
TOP2AP11388 FAM90A21P-201ENST00000510875 1396 ntBASIC25.23■■□□□ 1.63
TOP2AP11388 FAM90A15P-201ENST00000514465 1395 ntBASIC25.23■■□□□ 1.63
TOP2AP11388 FAM90A6P-201ENST00000515148 1394 ntBASIC25.23■■□□□ 1.63
TOP2AP11388 FAM90A16P-201ENST00000526662 1395 ntBASIC25.23■■□□□ 1.63
TOP2AP11388 FAM90A9P-201ENST00000527940 1395 ntBASIC25.23■■□□□ 1.63
TOP2AP11388 FAM90A5P-201ENST00000528738 1395 ntBASIC25.23■■□□□ 1.63
TOP2AP11388 FAM90A14P-201ENST00000530386 1395 ntBASIC25.23■■□□□ 1.63
TOP2AP11388 FAM90A13P-201ENST00000534703 1395 ntBASIC25.23■■□□□ 1.63
TOP2AP11388 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC25.23■■□□□ 1.63
TOP2AP11388 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TOP2AP11388 SAT1-201ENST00000379251 801 ntTSL 2 BASIC25.23■■□□□ 1.63
TOP2AP11388 SAT1-202ENST00000379253 909 ntTSL 2 BASIC25.23■■□□□ 1.63
TOP2AP11388 SAT1-203ENST00000379254 868 ntTSL 3 BASIC25.23■■□□□ 1.63
TOP2AP11388 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TOP2AP11388 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC25.23■■□□□ 1.63
TOP2AP11388 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC25.23■■□□□ 1.63
TOP2AP11388 CHCHD2P2-201ENST00000503744 321 ntBASIC25.23■■□□□ 1.63
TOP2AP11388 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC25.23■■□□□ 1.63
TOP2AP11388 AC012158.2-201ENST00000536546 354 ntBASIC25.23■■□□□ 1.63
TOP2AP11388 SNORD3B-1-201ENST00000577988 758 ntBASIC25.23■■□□□ 1.63
TOP2AP11388 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC25.23■■□□□ 1.63
TOP2AP11388 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
TOP2AP11388 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
TOP2AP11388 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC25.23■■□□□ 1.63
TOP2AP11388 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
TOP2AP11388 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TOP2AP11388 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC25.23■■□□□ 1.63
TOP2AP11388 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC25.23■■□□□ 1.63
TOP2AP11388 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TOP2AP11388 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC25.22■■□□□ 1.63
TOP2AP11388 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
TOP2AP11388 AC117503.4-201ENST00000623229 1418 ntBASIC25.22■■□□□ 1.63
TOP2AP11388 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC25.22■■□□□ 1.63
TOP2AP11388 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
TOP2AP11388 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC25.22■■□□□ 1.63
TOP2AP11388 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
TOP2AP11388 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC25.22■■□□□ 1.63
TOP2AP11388 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC25.22■■□□□ 1.63
TOP2AP11388 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC25.22■■□□□ 1.63
TOP2AP11388 RN7SL455P-201ENST00000580629 282 ntBASIC25.22■■□□□ 1.63
TOP2AP11388 PEBP1P2-201ENST00000603980 558 ntBASIC25.22■■□□□ 1.63
TOP2AP11388 HPX-213ENST00000615166 826 ntTSL 5 BASIC25.22■■□□□ 1.63
TOP2AP11388 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
TOP2AP11388 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC25.22■■□□□ 1.63
TOP2AP11388 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
TOP2AP11388 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
TOP2AP11388 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
TOP2AP11388 FUCA1P1-201ENST00000374476 1351 ntBASIC25.22■■□□□ 1.63
TOP2AP11388 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
TOP2AP11388 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC25.22■■□□□ 1.63
TOP2AP11388 SURF4-203ENST00000371991 715 ntTSL 3 BASIC25.22■■□□□ 1.63
TOP2AP11388 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
TOP2AP11388 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
TOP2AP11388 AC006987.1-201ENST00000413610 527 ntBASIC25.22■■□□□ 1.63
TOP2AP11388 FOXN3-AS2-201ENST00000554071 1262 ntBASIC25.22■■□□□ 1.63
TOP2AP11388 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC25.22■■□□□ 1.63
TOP2AP11388 AP005264.5-201ENST00000590066 467 ntBASIC25.22■■□□□ 1.63
TOP2AP11388 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC25.22■■□□□ 1.63
TOP2AP11388 RPS5-204ENST00000598098 536 ntTSL 2 BASIC25.22■■□□□ 1.63
TOP2AP11388 AC008972.2-201ENST00000606587 494 ntBASIC25.22■■□□□ 1.63
TOP2AP11388 TP53-221ENST00000615910 1149 ntTSL 5 BASIC25.22■■□□□ 1.63
TOP2AP11388 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
TOP2AP11388 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
TOP2AP11388 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC25.21■■□□□ 1.63
TOP2AP11388 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC25.21■■□□□ 1.63
TOP2AP11388 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC25.21■■□□□ 1.63
TOP2AP11388 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC25.21■■□□□ 1.63
TOP2AP11388 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
TOP2AP11388 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
TOP2AP11388 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
TOP2AP11388 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
TOP2AP11388 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
TOP2AP11388 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC25.21■■□□□ 1.63
TOP2AP11388 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
TOP2AP11388 DDX39AP1-201ENST00000445147 1181 ntBASIC25.21■■□□□ 1.63
TOP2AP11388 AC026470.1-201ENST00000478038 846 ntBASIC25.21■■□□□ 1.63
TOP2AP11388 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC25.21■■□□□ 1.63
TOP2AP11388 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC25.21■■□□□ 1.63
TOP2AP11388 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
TOP2AP11388 AC091769.1-201ENST00000619576 568 ntBASIC25.21■■□□□ 1.63
TOP2AP11388 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC25.21■■□□□ 1.63
TOP2AP11388 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC25.21■■□□□ 1.63
TOP2AP11388 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC25.21■■□□□ 1.63
TOP2AP11388 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
TOP2AP11388 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
TOP2AP11388 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
TOP2AP11388 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
TOP2AP11388 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
TOP2AP11388 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms