Protein–RNA interactions for Protein: P11171

EPB41, Protein 4.1, humanhuman

Known RBP Predictions only

Length 864 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41P11171 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
EPB41P11171 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
EPB41P11171 ACTG1P3-201ENST00000431775 1114 ntBASIC16.41■□□□□ 0.22
EPB41P11171 AC007969.1-201ENST00000433675 447 ntBASIC16.41■□□□□ 0.22
EPB41P11171 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.41■□□□□ 0.22
EPB41P11171 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
EPB41P11171 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.41■□□□□ 0.22
EPB41P11171 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
EPB41P11171 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.41■□□□□ 0.22
EPB41P11171 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
EPB41P11171 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.41■□□□□ 0.22
EPB41P11171 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.41■□□□□ 0.22
EPB41P11171 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.41■□□□□ 0.22
EPB41P11171 AC027307.3-201ENST00000594262 1100 ntBASIC16.41■□□□□ 0.22
EPB41P11171 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.41■□□□□ 0.22
EPB41P11171 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
EPB41P11171 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.41■□□□□ 0.22
EPB41P11171 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
EPB41P11171 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
EPB41P11171 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
EPB41P11171 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.41■□□□□ 0.22
EPB41P11171 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.41■□□□□ 0.22
EPB41P11171 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
EPB41P11171 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
EPB41P11171 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.41■□□□□ 0.22
EPB41P11171 BEND3P1-201ENST00000421591 1944 ntBASIC16.41■□□□□ 0.22
EPB41P11171 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.41■□□□□ 0.22
EPB41P11171 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.41■□□□□ 0.22
EPB41P11171 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
EPB41P11171 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
EPB41P11171 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EPB41P11171 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EPB41P11171 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
EPB41P11171 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
EPB41P11171 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.4■□□□□ 0.22
EPB41P11171 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EPB41P11171 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
EPB41P11171 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EPB41P11171 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EPB41P11171 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
EPB41P11171 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
EPB41P11171 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.4■□□□□ 0.22
EPB41P11171 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
EPB41P11171 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
EPB41P11171 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
EPB41P11171 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
EPB41P11171 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.4■□□□□ 0.22
EPB41P11171 AC098614.1-201ENST00000368528 745 ntBASIC16.4■□□□□ 0.22
EPB41P11171 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
EPB41P11171 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
EPB41P11171 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.4■□□□□ 0.22
EPB41P11171 BAATP1-201ENST00000412284 1225 ntBASIC16.4■□□□□ 0.22
EPB41P11171 TLE1P1-201ENST00000422965 589 ntBASIC16.4■□□□□ 0.22
EPB41P11171 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
EPB41P11171 AC012441.1-201ENST00000446669 685 ntBASIC16.4■□□□□ 0.22
EPB41P11171 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.4■□□□□ 0.22
EPB41P11171 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.4■□□□□ 0.22
EPB41P11171 TDH-203ENST00000531764 1110 ntBASIC16.4■□□□□ 0.22
EPB41P11171 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
EPB41P11171 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
EPB41P11171 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
EPB41P11171 MIR5189-201ENST00000577370 114 ntBASIC16.4■□□□□ 0.22
EPB41P11171 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.4■□□□□ 0.22
EPB41P11171 AC138761.1-201ENST00000584393 385 ntBASIC16.4■□□□□ 0.22
EPB41P11171 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
EPB41P11171 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
EPB41P11171 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
EPB41P11171 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
EPB41P11171 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EPB41P11171 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC16.4■□□□□ 0.22
EPB41P11171 SALL4P5-201ENST00000419001 1760 ntBASIC16.4■□□□□ 0.22
EPB41P11171 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EPB41P11171 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC16.4■□□□□ 0.22
EPB41P11171 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EPB41P11171 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
EPB41P11171 AC134312.5-201ENST00000568031 1313 ntBASIC16.4■□□□□ 0.22
EPB41P11171 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
EPB41P11171 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
EPB41P11171 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.4■□□□□ 0.22
EPB41P11171 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EPB41P11171 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.22
EPB41P11171 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
EPB41P11171 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
EPB41P11171 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.39■□□□□ 0.22
EPB41P11171 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPB41P11171 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.39■□□□□ 0.21
EPB41P11171 MSTO2P-201ENST00000314835 1709 ntBASIC16.39■□□□□ 0.21
EPB41P11171 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.39■□□□□ 0.21
EPB41P11171 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC16.39■□□□□ 0.21
EPB41P11171 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPB41P11171 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
EPB41P11171 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.39■□□□□ 0.21
EPB41P11171 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPB41P11171 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPB41P11171 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPB41P11171 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.39■□□□□ 0.21
EPB41P11171 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
EPB41P11171 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
EPB41P11171 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPB41P11171 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms