Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC21.28■■□□□ 1
CHGAP10645 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC21.28■■□□□ 1
CHGAP10645 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC21.28■■□□□ 1
CHGAP10645 PHBP15-201ENST00000574228 665 ntBASIC21.28■■□□□ 1
CHGAP10645 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC21.28■■□□□ 1
CHGAP10645 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHGAP10645 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CHGAP10645 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHGAP10645 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHGAP10645 TMBIM7P-202ENST00000641474 1516 ntBASIC21.28■■□□□ 1
CHGAP10645 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CHGAP10645 AC099398.1-201ENST00000567919 2776 ntBASIC21.28■■□□□ 1
CHGAP10645 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHGAP10645 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHGAP10645 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHGAP10645 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC21.27■■□□□ 1
CHGAP10645 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
CHGAP10645 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CHGAP10645 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHGAP10645 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
CHGAP10645 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CHGAP10645 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC21.27■■□□□ 1
CHGAP10645 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHGAP10645 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHGAP10645 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHGAP10645 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHGAP10645 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHGAP10645 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC21.27■■□□□ 1
CHGAP10645 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
CHGAP10645 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC21.27■■□□□ 1
CHGAP10645 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC21.27■■□□□ 1
CHGAP10645 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHGAP10645 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
CHGAP10645 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHGAP10645 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHGAP10645 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC21.27■■□□□ 1
CHGAP10645 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHGAP10645 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC21.27■■□□□ 1
CHGAP10645 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHGAP10645 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC21.27■■□□□ 1
CHGAP10645 VPS18-202ENST00000558474 873 ntTSL 3 BASIC21.27■■□□□ 1
CHGAP10645 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHGAP10645 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
CHGAP10645 MIR4522-201ENST00000584932 87 ntBASIC21.27■■□□□ 1
CHGAP10645 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC21.27■■□□□ 1
CHGAP10645 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHGAP10645 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC21.27■■□□□ 1
CHGAP10645 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC21.27■■□□□ 1
CHGAP10645 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC21.27■■□□□ 1
CHGAP10645 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CHGAP10645 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC21.27■■□□□ 1
CHGAP10645 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CHGAP10645 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHGAP10645 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC21.27■■□□□ 1
CHGAP10645 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC21.27■■□□□ 1
CHGAP10645 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CHGAP10645 AC136621.1-201ENST00000624017 2304 ntBASIC21.27■□□□□ 0.99
CHGAP10645 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC21.27■□□□□ 0.99
CHGAP10645 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
CHGAP10645 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CHGAP10645 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC21.27■□□□□ 0.99
CHGAP10645 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
CHGAP10645 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC21.26■□□□□ 0.99
CHGAP10645 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHGAP10645 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHGAP10645 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHGAP10645 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHGAP10645 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHGAP10645 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC21.26■□□□□ 0.99
CHGAP10645 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHGAP10645 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHGAP10645 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC21.26■□□□□ 0.99
CHGAP10645 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHGAP10645 HNRNPA1P27-201ENST00000412087 955 ntBASIC21.26■□□□□ 0.99
CHGAP10645 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC21.26■□□□□ 0.99
CHGAP10645 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC21.26■□□□□ 0.99
CHGAP10645 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC21.26■□□□□ 0.99
CHGAP10645 RN7SL371P-201ENST00000578099 267 ntBASIC21.26■□□□□ 0.99
CHGAP10645 HPN-206ENST00000597419 1212 ntTSL 5 BASIC21.26■□□□□ 0.99
CHGAP10645 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC21.26■□□□□ 0.99
CHGAP10645 AC005632.3-201ENST00000605544 308 ntBASIC21.26■□□□□ 0.99
CHGAP10645 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC21.26■□□□□ 0.99
CHGAP10645 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC21.26■□□□□ 0.99
CHGAP10645 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC21.26■□□□□ 0.99
CHGAP10645 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHGAP10645 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHGAP10645 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHGAP10645 DOC2GP-204ENST00000639052 2548 ntBASIC21.26■□□□□ 0.99
CHGAP10645 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC21.26■□□□□ 0.99
CHGAP10645 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC21.26■□□□□ 0.99
CHGAP10645 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CHGAP10645 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
CHGAP10645 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHGAP10645 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHGAP10645 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHGAP10645 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHGAP10645 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHGAP10645 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHGAP10645 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHGAP10645 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms