Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 AL513190.1-201ENST00000621254 727 ntBASIC11.22□□□□□ -0.61
SMIM17P0DL12 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM17P0DL12 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM17P0DL12 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM17P0DL12 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM17P0DL12 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM17P0DL12 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM17P0DL12 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM17P0DL12 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM17P0DL12 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM17P0DL12 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
SMIM17P0DL12 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMIM17P0DL12 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC11.22□□□□□ -0.61
SMIM17P0DL12 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC11.22□□□□□ -0.61
SMIM17P0DL12 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
SMIM17P0DL12 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
SMIM17P0DL12 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM17P0DL12 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM17P0DL12 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC11.21□□□□□ -0.61
SMIM17P0DL12 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC11.21□□□□□ -0.61
SMIM17P0DL12 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM17P0DL12 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
SMIM17P0DL12 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM17P0DL12 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM17P0DL12 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM17P0DL12 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC11.21□□□□□ -0.61
SMIM17P0DL12 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM17P0DL12 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC11.21□□□□□ -0.61
SMIM17P0DL12 AC092135.3-201ENST00000624151 1846 ntBASIC11.21□□□□□ -0.61
SMIM17P0DL12 PDE7B-201ENST00000308191 5390 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM17P0DL12 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM17P0DL12 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM17P0DL12 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM17P0DL12 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC11.21□□□□□ -0.61
SMIM17P0DL12 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM17P0DL12 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM17P0DL12 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM17P0DL12 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM17P0DL12 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC11.21□□□□□ -0.61
SMIM17P0DL12 AC012508.2-201ENST00000567613 1472 ntBASIC11.21□□□□□ -0.61
SMIM17P0DL12 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM17P0DL12 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
SMIM17P0DL12 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM17P0DL12 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM17P0DL12 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM17P0DL12 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM17P0DL12 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM17P0DL12 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM17P0DL12 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM17P0DL12 MRPL3P1-201ENST00000400109 1033 ntBASIC11.21□□□□□ -0.61
SMIM17P0DL12 FO393414.2-201ENST00000405153 598 ntBASIC11.21□□□□□ -0.61
SMIM17P0DL12 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM17P0DL12 FAM58CP-201ENST00000435741 640 ntBASIC11.21□□□□□ -0.61
SMIM17P0DL12 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC11.21□□□□□ -0.61
SMIM17P0DL12 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC11.21□□□□□ -0.61
SMIM17P0DL12 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM17P0DL12 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC11.21□□□□□ -0.61
SMIM17P0DL12 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC11.21□□□□□ -0.61
SMIM17P0DL12 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC11.21□□□□□ -0.61
SMIM17P0DL12 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC11.21□□□□□ -0.61
SMIM17P0DL12 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC11.21□□□□□ -0.61
SMIM17P0DL12 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC11.21□□□□□ -0.61
SMIM17P0DL12 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM17P0DL12 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC11.21□□□□□ -0.61
SMIM17P0DL12 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC11.21□□□□□ -0.61
SMIM17P0DL12 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM17P0DL12 AC034105.1-201ENST00000563488 319 ntBASIC11.21□□□□□ -0.61
SMIM17P0DL12 CMC2-214ENST00000565925 640 ntTSL 5 BASIC11.21□□□□□ -0.61
SMIM17P0DL12 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC11.21□□□□□ -0.61
SMIM17P0DL12 IGHV3OR16-6-201ENST00000568775 360 ntBASIC11.21□□□□□ -0.61
SMIM17P0DL12 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM17P0DL12 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC11.21□□□□□ -0.61
SMIM17P0DL12 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC11.21□□□□□ -0.61
SMIM17P0DL12 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC11.21□□□□□ -0.61
SMIM17P0DL12 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC11.21□□□□□ -0.61
SMIM17P0DL12 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
SMIM17P0DL12 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMIM17P0DL12 AC097359.2-201ENST00000604992 2389 ntBASIC11.21□□□□□ -0.62
SMIM17P0DL12 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC11.21□□□□□ -0.62
SMIM17P0DL12 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
SMIM17P0DL12 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SMIM17P0DL12 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
SMIM17P0DL12 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SMIM17P0DL12 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
SMIM17P0DL12 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC11.21□□□□□ -0.62
SMIM17P0DL12 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
SMIM17P0DL12 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
SMIM17P0DL12 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SMIM17P0DL12 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
SMIM17P0DL12 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SMIM17P0DL12 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
SMIM17P0DL12 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
SMIM17P0DL12 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SMIM17P0DL12 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC11.21□□□□□ -0.62
SMIM17P0DL12 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC11.2□□□□□ -0.62
SMIM17P0DL12 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
SMIM17P0DL12 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SMIM17P0DL12 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SMIM17P0DL12 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SMIM17P0DL12 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC11.2□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms