Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
IFNA1P01562 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC11.86□□□□□ -0.51
IFNA1P01562 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC11.86□□□□□ -0.51
IFNA1P01562 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
IFNA1P01562 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
IFNA1P01562 ERI1-209ENST00000523898 5036 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
IFNA1P01562 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
IFNA1P01562 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
IFNA1P01562 AC004241.5-201ENST00000623870 2448 ntBASIC11.86□□□□□ -0.51
IFNA1P01562 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
IFNA1P01562 HAL-202ENST00000538703 2637 ntTSL 2 BASIC11.86□□□□□ -0.51
IFNA1P01562 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC11.86□□□□□ -0.51
IFNA1P01562 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
IFNA1P01562 AC118758.2-201ENST00000614242 2813 ntBASIC11.86□□□□□ -0.51
IFNA1P01562 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
IFNA1P01562 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
IFNA1P01562 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC11.86□□□□□ -0.51
IFNA1P01562 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
IFNA1P01562 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC11.86□□□□□ -0.51
IFNA1P01562 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
IFNA1P01562 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC11.86□□□□□ -0.51
IFNA1P01562 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
IFNA1P01562 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
IFNA1P01562 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC11.86□□□□□ -0.51
IFNA1P01562 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC11.86□□□□□ -0.51
IFNA1P01562 AC093827.2-201ENST00000512654 315 ntBASIC11.86□□□□□ -0.51
IFNA1P01562 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC11.86□□□□□ -0.51
IFNA1P01562 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC11.86□□□□□ -0.51
IFNA1P01562 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
IFNA1P01562 CD63-210ENST00000550776 870 ntTSL 5 BASIC11.86□□□□□ -0.51
IFNA1P01562 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
IFNA1P01562 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC11.86□□□□□ -0.51
IFNA1P01562 SPIB-207ENST00000597855 564 ntTSL 4 BASIC11.86□□□□□ -0.51
IFNA1P01562 AL356488.2-201ENST00000602755 427 ntBASIC11.86□□□□□ -0.51
IFNA1P01562 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC11.86□□□□□ -0.51
IFNA1P01562 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
IFNA1P01562 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
IFNA1P01562 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC11.86□□□□□ -0.51
IFNA1P01562 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC11.86□□□□□ -0.51
IFNA1P01562 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC11.86□□□□□ -0.51
IFNA1P01562 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
IFNA1P01562 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
IFNA1P01562 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
IFNA1P01562 AC068760.1-201ENST00000493579 1953 ntBASIC11.86□□□□□ -0.51
IFNA1P01562 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
IFNA1P01562 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
IFNA1P01562 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
IFNA1P01562 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
IFNA1P01562 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
IFNA1P01562 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
IFNA1P01562 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC11.86□□□□□ -0.51
IFNA1P01562 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC11.86□□□□□ -0.51
IFNA1P01562 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
IFNA1P01562 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
IFNA1P01562 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
IFNA1P01562 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
IFNA1P01562 FOS-202ENST00000535987 1402 ntTSL 2 BASIC11.86□□□□□ -0.51
IFNA1P01562 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
IFNA1P01562 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
IFNA1P01562 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC11.85□□□□□ -0.51
IFNA1P01562 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
IFNA1P01562 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
IFNA1P01562 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
IFNA1P01562 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC11.85□□□□□ -0.51
IFNA1P01562 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
IFNA1P01562 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
IFNA1P01562 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC11.85□□□□□ -0.51
IFNA1P01562 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
IFNA1P01562 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC11.85□□□□□ -0.51
IFNA1P01562 MX1-218ENST00000619682 1980 ntTSL 5 BASIC11.85□□□□□ -0.51
IFNA1P01562 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
IFNA1P01562 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
IFNA1P01562 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC11.85□□□□□ -0.51
IFNA1P01562 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
IFNA1P01562 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC11.85□□□□□ -0.51
IFNA1P01562 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
IFNA1P01562 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
IFNA1P01562 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
IFNA1P01562 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
IFNA1P01562 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
IFNA1P01562 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
IFNA1P01562 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
IFNA1P01562 HIST2H3DP1-201ENST00000401004 416 ntBASIC11.85□□□□□ -0.51
IFNA1P01562 AC104457.1-201ENST00000401024 814 ntBASIC11.85□□□□□ -0.51
IFNA1P01562 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC11.85□□□□□ -0.51
IFNA1P01562 FXR1-221ENST00000491674 365 ntTSL 2 BASIC11.85□□□□□ -0.51
IFNA1P01562 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC11.85□□□□□ -0.51
IFNA1P01562 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC11.85□□□□□ -0.51
IFNA1P01562 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC11.85□□□□□ -0.51
IFNA1P01562 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC11.85□□□□□ -0.51
IFNA1P01562 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC11.85□□□□□ -0.51
IFNA1P01562 AC021087.4-201ENST00000563761 564 ntBASIC11.85□□□□□ -0.51
IFNA1P01562 MIR4751-201ENST00000578027 74 ntBASIC11.85□□□□□ -0.51
IFNA1P01562 MIR3180-1-201ENST00000580374 94 ntBASIC11.85□□□□□ -0.51
IFNA1P01562 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC11.85□□□□□ -0.51
IFNA1P01562 MIR3180-3-201ENST00000584616 94 ntBASIC11.85□□□□□ -0.51
IFNA1P01562 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC11.85□□□□□ -0.51
IFNA1P01562 AC073389.1-201ENST00000595595 795 ntBASIC11.85□□□□□ -0.51
IFNA1P01562 AL031008.1-201ENST00000619963 541 ntBASIC11.85□□□□□ -0.51
IFNA1P01562 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms