Protein–RNA interactions for Protein: O95407

TNFRSF6B, Tumor necrosis factor receptor superfamily member 6B, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6BO95407 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TNFRSF6BO95407 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TNFRSF6BO95407 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TNFRSF6BO95407 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
TNFRSF6BO95407 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 TFAMP1-201ENST00000412727 736 ntBASIC10.91□□□□□ -0.66
TNFRSF6BO95407 USP40-206ENST00000443711 628 ntTSL 2 BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 SLED1-202ENST00000512051 380 ntBASIC10.91□□□□□ -0.66
TNFRSF6BO95407 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 TNN-202ENST00000621086 4234 ntTSL 5 BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 AC020910.6-201ENST00000623084 1459 ntBASIC10.91□□□□□ -0.66
TNFRSF6BO95407 FAM90A12P-201ENST00000519497 2375 ntBASIC10.91□□□□□ -0.66
TNFRSF6BO95407 FAM90A24P-201ENST00000520792 2369 ntBASIC10.91□□□□□ -0.66
TNFRSF6BO95407 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 PES1-204ENST00000402284 2144 ntTSL 5 BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 INVS-201ENST00000262456 2968 ntTSL 5 BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TNFRSF6BO95407 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC10.9□□□□□ -0.66
TNFRSF6BO95407 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TNFRSF6BO95407 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TNFRSF6BO95407 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
TNFRSF6BO95407 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
TNFRSF6BO95407 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TNFRSF6BO95407 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
TNFRSF6BO95407 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC10.9□□□□□ -0.66
TNFRSF6BO95407 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TNFRSF6BO95407 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TNFRSF6BO95407 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
TNFRSF6BO95407 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
TNFRSF6BO95407 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TNFRSF6BO95407 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
TNFRSF6BO95407 Z82170.1-201ENST00000625081 3192 ntBASIC10.9□□□□□ -0.66
TNFRSF6BO95407 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
TNFRSF6BO95407 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
TNFRSF6BO95407 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
TNFRSF6BO95407 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
TNFRSF6BO95407 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
TNFRSF6BO95407 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TNFRSF6BO95407 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
TNFRSF6BO95407 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
TNFRSF6BO95407 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
TNFRSF6BO95407 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
TNFRSF6BO95407 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
TNFRSF6BO95407 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TNFRSF6BO95407 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TNFRSF6BO95407 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TNFRSF6BO95407 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TNFRSF6BO95407 MIR346-201ENST00000362234 95 ntBASIC10.9□□□□□ -0.66
TNFRSF6BO95407 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
TNFRSF6BO95407 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
TNFRSF6BO95407 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
TNFRSF6BO95407 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TNFRSF6BO95407 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC10.9□□□□□ -0.66
TNFRSF6BO95407 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
TNFRSF6BO95407 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC10.9□□□□□ -0.66
TNFRSF6BO95407 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC10.9□□□□□ -0.66
TNFRSF6BO95407 RNA5SP415-201ENST00000517246 115 ntBASIC10.9□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms