Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC104819.1-201ENST00000504587 486 ntBASIC13□□□□□ -0.33
UPK1BO75841 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13□□□□□ -0.33
UPK1BO75841 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13□□□□□ -0.33
UPK1BO75841 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13□□□□□ -0.33
UPK1BO75841 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13□□□□□ -0.33
UPK1BO75841 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UPK1BO75841 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13□□□□□ -0.33
UPK1BO75841 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC13□□□□□ -0.33
UPK1BO75841 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13□□□□□ -0.33
UPK1BO75841 AC099336.1-202ENST00000602961 463 ntBASIC13□□□□□ -0.33
UPK1BO75841 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13□□□□□ -0.33
UPK1BO75841 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13□□□□□ -0.33
UPK1BO75841 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
UPK1BO75841 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
UPK1BO75841 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC13□□□□□ -0.33
UPK1BO75841 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC13□□□□□ -0.33
UPK1BO75841 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
UPK1BO75841 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC13□□□□□ -0.33
UPK1BO75841 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13□□□□□ -0.33
UPK1BO75841 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
UPK1BO75841 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13□□□□□ -0.33
UPK1BO75841 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC13□□□□□ -0.33
UPK1BO75841 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UPK1BO75841 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
UPK1BO75841 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UPK1BO75841 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UPK1BO75841 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
UPK1BO75841 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
UPK1BO75841 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UPK1BO75841 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
UPK1BO75841 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.99□□□□□ -0.33
UPK1BO75841 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
UPK1BO75841 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.99□□□□□ -0.33
UPK1BO75841 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
UPK1BO75841 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
UPK1BO75841 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
UPK1BO75841 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
UPK1BO75841 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC12.99□□□□□ -0.33
UPK1BO75841 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UPK1BO75841 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC12.99□□□□□ -0.33
UPK1BO75841 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
UPK1BO75841 TERF1P1-201ENST00000311003 1181 ntBASIC12.99□□□□□ -0.33
UPK1BO75841 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
UPK1BO75841 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
UPK1BO75841 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC12.99□□□□□ -0.33
UPK1BO75841 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
UPK1BO75841 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC12.99□□□□□ -0.33
UPK1BO75841 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
UPK1BO75841 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.99□□□□□ -0.33
UPK1BO75841 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
UPK1BO75841 SART3-203ENST00000546611 1184 ntBASIC12.99□□□□□ -0.33
UPK1BO75841 AC015910.1-201ENST00000579400 975 ntBASIC12.99□□□□□ -0.33
UPK1BO75841 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC12.99□□□□□ -0.33
UPK1BO75841 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
UPK1BO75841 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
UPK1BO75841 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
UPK1BO75841 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC12.99□□□□□ -0.33
UPK1BO75841 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UPK1BO75841 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
UPK1BO75841 SUPT20HL1-201ENST00000436466 2618 ntBASIC12.99□□□□□ -0.33
UPK1BO75841 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
UPK1BO75841 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
UPK1BO75841 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UPK1BO75841 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
UPK1BO75841 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
UPK1BO75841 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
UPK1BO75841 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
UPK1BO75841 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UPK1BO75841 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.99□□□□□ -0.33
UPK1BO75841 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UPK1BO75841 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
UPK1BO75841 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC12.99□□□□□ -0.33
UPK1BO75841 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
UPK1BO75841 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UPK1BO75841 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
UPK1BO75841 AC009474.1-201ENST00000455096 1565 ntBASIC12.98□□□□□ -0.33
UPK1BO75841 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.98□□□□□ -0.33
UPK1BO75841 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
UPK1BO75841 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
UPK1BO75841 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
UPK1BO75841 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC12.98□□□□□ -0.33
UPK1BO75841 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.98□□□□□ -0.33
UPK1BO75841 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UPK1BO75841 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.98□□□□□ -0.33
UPK1BO75841 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
UPK1BO75841 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC12.98□□□□□ -0.33
UPK1BO75841 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UPK1BO75841 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UPK1BO75841 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UPK1BO75841 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC12.98□□□□□ -0.33
UPK1BO75841 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.98□□□□□ -0.33
UPK1BO75841 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.98□□□□□ -0.33
UPK1BO75841 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC12.98□□□□□ -0.33
UPK1BO75841 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
UPK1BO75841 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
UPK1BO75841 AC113347.1-201ENST00000413321 391 ntBASIC12.98□□□□□ -0.33
UPK1BO75841 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.98□□□□□ -0.33
UPK1BO75841 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC12.98□□□□□ -0.33
UPK1BO75841 KRT18P27-201ENST00000427733 1299 ntBASIC12.98□□□□□ -0.33
UPK1BO75841 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms