Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCMT2O60294 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LCMT2O60294 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LCMT2O60294 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.28□□□□□ -0.12
LCMT2O60294 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LCMT2O60294 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LCMT2O60294 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LCMT2O60294 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LCMT2O60294 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LCMT2O60294 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LCMT2O60294 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LCMT2O60294 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LCMT2O60294 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LCMT2O60294 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LCMT2O60294 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.28□□□□□ -0.12
LCMT2O60294 GK-202ENST00000378941 458 ntTSL 3 BASIC14.28□□□□□ -0.12
LCMT2O60294 MIR658-201ENST00000385210 100 ntBASIC14.28□□□□□ -0.12
LCMT2O60294 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LCMT2O60294 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LCMT2O60294 RN7SKP175-201ENST00000408472 289 ntBASIC14.28□□□□□ -0.12
LCMT2O60294 AC004945.1-201ENST00000416738 983 ntBASIC14.28□□□□□ -0.12
LCMT2O60294 AC099336.1-201ENST00000417053 1171 ntBASIC14.28□□□□□ -0.12
LCMT2O60294 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.28□□□□□ -0.12
LCMT2O60294 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.28□□□□□ -0.12
LCMT2O60294 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.28□□□□□ -0.12
LCMT2O60294 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LCMT2O60294 COX5BP1-201ENST00000507622 393 ntBASIC14.28□□□□□ -0.12
LCMT2O60294 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.28□□□□□ -0.12
LCMT2O60294 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.28□□□□□ -0.12
LCMT2O60294 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LCMT2O60294 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.28□□□□□ -0.12
LCMT2O60294 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.28□□□□□ -0.12
LCMT2O60294 AC131206.1-201ENST00000538078 1211 ntBASIC14.28□□□□□ -0.12
LCMT2O60294 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
LCMT2O60294 AC232323.1-201ENST00000540724 2099 ntBASIC14.28□□□□□ -0.12
LCMT2O60294 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.28□□□□□ -0.12
LCMT2O60294 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.28□□□□□ -0.12
LCMT2O60294 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.28□□□□□ -0.12
LCMT2O60294 C2orf69P2-201ENST00000562032 1123 ntBASIC14.28□□□□□ -0.12
LCMT2O60294 MIR4683-201ENST00000579659 81 ntBASIC14.28□□□□□ -0.12
LCMT2O60294 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.28□□□□□ -0.12
LCMT2O60294 AC073413.1-201ENST00000603927 732 ntBASIC14.28□□□□□ -0.12
LCMT2O60294 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.28□□□□□ -0.12
LCMT2O60294 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.28□□□□□ -0.12
LCMT2O60294 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
LCMT2O60294 COX11-210ENST00000639671 696 ntBASIC14.28□□□□□ -0.12
LCMT2O60294 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LCMT2O60294 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.28□□□□□ -0.12
LCMT2O60294 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LCMT2O60294 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LCMT2O60294 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LCMT2O60294 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.28□□□□□ -0.12
LCMT2O60294 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LCMT2O60294 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
LCMT2O60294 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.28□□□□□ -0.12
LCMT2O60294 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.27□□□□□ -0.12
LCMT2O60294 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LCMT2O60294 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LCMT2O60294 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.27□□□□□ -0.12
LCMT2O60294 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LCMT2O60294 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.27□□□□□ -0.12
LCMT2O60294 AL354702.1-201ENST00000442006 1960 ntBASIC14.27□□□□□ -0.12
LCMT2O60294 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LCMT2O60294 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
LCMT2O60294 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LCMT2O60294 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LCMT2O60294 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LCMT2O60294 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LCMT2O60294 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LCMT2O60294 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LCMT2O60294 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LCMT2O60294 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LCMT2O60294 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.27□□□□□ -0.13
LCMT2O60294 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.27□□□□□ -0.13
LCMT2O60294 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LCMT2O60294 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LCMT2O60294 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LCMT2O60294 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
LCMT2O60294 HLA-V-201ENST00000429037 534 ntBASIC14.27□□□□□ -0.13
LCMT2O60294 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LCMT2O60294 ATP5G2P4-201ENST00000442175 420 ntBASIC14.27□□□□□ -0.13
LCMT2O60294 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.27□□□□□ -0.13
LCMT2O60294 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LCMT2O60294 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LCMT2O60294 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.27□□□□□ -0.13
LCMT2O60294 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.27□□□□□ -0.13
LCMT2O60294 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LCMT2O60294 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.27□□□□□ -0.13
LCMT2O60294 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LCMT2O60294 AP005482.1-201ENST00000563722 1273 ntBASIC14.27□□□□□ -0.13
LCMT2O60294 RN7SL713P-201ENST00000582127 302 ntBASIC14.27□□□□□ -0.13
LCMT2O60294 AC008687.7-202ENST00000637404 953 ntBASIC14.27□□□□□ -0.13
LCMT2O60294 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
LCMT2O60294 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.27□□□□□ -0.13
LCMT2O60294 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LCMT2O60294 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
LCMT2O60294 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.27□□□□□ -0.13
LCMT2O60294 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.27□□□□□ -0.13
LCMT2O60294 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LCMT2O60294 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms