Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A1O14983 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A1O14983 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A1O14983 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A1O14983 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A1O14983 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A1O14983 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A1O14983 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
ATP2A1O14983 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A1O14983 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP2A1O14983 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP2A1O14983 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17■□□□□ 0.31
ATP2A1O14983 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
ATP2A1O14983 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17■□□□□ 0.31
ATP2A1O14983 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP2A1O14983 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17■□□□□ 0.31
ATP2A1O14983 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP2A1O14983 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17■□□□□ 0.31
ATP2A1O14983 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP2A1O14983 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC17■□□□□ 0.31
ATP2A1O14983 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP2A1O14983 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC17■□□□□ 0.31
ATP2A1O14983 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP2A1O14983 PARVG-202ENST00000415224 999 ntTSL 2 BASIC17■□□□□ 0.31
ATP2A1O14983 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
ATP2A1O14983 ISCA2P1-201ENST00000425548 448 ntBASIC17■□□□□ 0.31
ATP2A1O14983 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17■□□□□ 0.31
ATP2A1O14983 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC17■□□□□ 0.31
ATP2A1O14983 AL353637.1-201ENST00000451571 732 ntBASIC17■□□□□ 0.31
ATP2A1O14983 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC17■□□□□ 0.31
ATP2A1O14983 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC17■□□□□ 0.31
ATP2A1O14983 MIR3907-201ENST00000579424 151 ntBASIC17■□□□□ 0.31
ATP2A1O14983 AC005962.1-201ENST00000584100 773 ntBASIC17■□□□□ 0.31
ATP2A1O14983 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC17■□□□□ 0.31
ATP2A1O14983 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17■□□□□ 0.31
ATP2A1O14983 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
ATP2A1O14983 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC17■□□□□ 0.31
ATP2A1O14983 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ATP2A1O14983 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ATP2A1O14983 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP2A1O14983 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17■□□□□ 0.31
ATP2A1O14983 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
ATP2A1O14983 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC17■□□□□ 0.31
ATP2A1O14983 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP2A1O14983 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP2A1O14983 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17■□□□□ 0.31
ATP2A1O14983 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP2A1O14983 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP2A1O14983 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP2A1O14983 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP2A1O14983 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP2A1O14983 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP2A1O14983 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ATP2A1O14983 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.99■□□□□ 0.31
ATP2A1O14983 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ATP2A1O14983 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP2A1O14983 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
ATP2A1O14983 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP2A1O14983 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
ATP2A1O14983 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP2A1O14983 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
ATP2A1O14983 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.99■□□□□ 0.31
ATP2A1O14983 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC16.99■□□□□ 0.31
ATP2A1O14983 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC16.99■□□□□ 0.31
ATP2A1O14983 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.99■□□□□ 0.31
ATP2A1O14983 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.99■□□□□ 0.31
ATP2A1O14983 PARP8-218ENST00000513738 596 ntTSL 4 BASIC16.99■□□□□ 0.31
ATP2A1O14983 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC16.99■□□□□ 0.31
ATP2A1O14983 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP2A1O14983 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC16.99■□□□□ 0.31
ATP2A1O14983 AC103988.2-201ENST00000561804 725 ntBASIC16.99■□□□□ 0.31
ATP2A1O14983 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC16.99■□□□□ 0.31
ATP2A1O14983 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP2A1O14983 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.99■□□□□ 0.31
ATP2A1O14983 AC128714.1-201ENST00000637035 887 ntBASIC16.99■□□□□ 0.31
ATP2A1O14983 NAP1L6-202ENST00000641404 1222 ntBASIC16.99■□□□□ 0.31
ATP2A1O14983 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP2A1O14983 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.99■□□□□ 0.31
ATP2A1O14983 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP2A1O14983 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.99■□□□□ 0.31
ATP2A1O14983 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.99■□□□□ 0.31
ATP2A1O14983 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP2A1O14983 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.99■□□□□ 0.31
ATP2A1O14983 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.99■□□□□ 0.31
ATP2A1O14983 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP2A1O14983 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
ATP2A1O14983 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
ATP2A1O14983 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP2A1O14983 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.98■□□□□ 0.31
ATP2A1O14983 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ATP2A1O14983 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATP2A1O14983 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.98■□□□□ 0.31
ATP2A1O14983 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
ATP2A1O14983 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
ATP2A1O14983 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATP2A1O14983 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.98■□□□□ 0.31
ATP2A1O14983 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATP2A1O14983 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC16.98■□□□□ 0.31
ATP2A1O14983 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ATP2A1O14983 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 139.6 ms