Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SLC28A1O00337 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A1O00337 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC28A1O00337 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.41□□□□□ -0.1
SLC28A1O00337 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.41□□□□□ -0.1
SLC28A1O00337 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.41□□□□□ -0.1
SLC28A1O00337 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A1O00337 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A1O00337 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC28A1O00337 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SLC28A1O00337 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC28A1O00337 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.41□□□□□ -0.1
SLC28A1O00337 AC092552.1-201ENST00000547243 906 ntBASIC14.41□□□□□ -0.1
SLC28A1O00337 AL359711.2-201ENST00000563105 872 ntBASIC14.41□□□□□ -0.1
SLC28A1O00337 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
SLC28A1O00337 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.41□□□□□ -0.1
SLC28A1O00337 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A1O00337 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.41□□□□□ -0.1
SLC28A1O00337 AC133539.2-201ENST00000604757 467 ntBASIC14.41□□□□□ -0.1
SLC28A1O00337 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A1O00337 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SLC28A1O00337 AP005019.2-201ENST00000615104 511 ntBASIC14.41□□□□□ -0.1
SLC28A1O00337 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC28A1O00337 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A1O00337 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
SLC28A1O00337 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A1O00337 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A1O00337 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A1O00337 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.41□□□□□ -0.1
SLC28A1O00337 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC28A1O00337 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SLC28A1O00337 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SLC28A1O00337 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A1O00337 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC28A1O00337 AL359881.3-201ENST00000602640 1721 ntBASIC14.41□□□□□ -0.1
SLC28A1O00337 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
SLC28A1O00337 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A1O00337 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A1O00337 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.4□□□□□ -0.1
SLC28A1O00337 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A1O00337 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SLC28A1O00337 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SLC28A1O00337 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SLC28A1O00337 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A1O00337 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A1O00337 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A1O00337 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.4□□□□□ -0.1
SLC28A1O00337 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.4□□□□□ -0.1
SLC28A1O00337 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A1O00337 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
SLC28A1O00337 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A1O00337 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A1O00337 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.4□□□□□ -0.1
SLC28A1O00337 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A1O00337 AL928921.2-201ENST00000641325 2442 ntBASIC14.4□□□□□ -0.1
SLC28A1O00337 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SLC28A1O00337 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A1O00337 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A1O00337 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
SLC28A1O00337 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A1O00337 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A1O00337 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A1O00337 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A1O00337 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SLC28A1O00337 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SLC28A1O00337 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.4□□□□□ -0.1
SLC28A1O00337 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.4□□□□□ -0.1
SLC28A1O00337 RNA5SP421-201ENST00000516864 134 ntBASIC14.4□□□□□ -0.1
SLC28A1O00337 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
SLC28A1O00337 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A1O00337 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.4□□□□□ -0.1
SLC28A1O00337 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.4□□□□□ -0.1
SLC28A1O00337 AC005498.2-205ENST00000593218 784 ntBASIC14.4□□□□□ -0.1
SLC28A1O00337 AC009118.2-201ENST00000613275 655 ntBASIC14.4□□□□□ -0.1
SLC28A1O00337 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SLC28A1O00337 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A1O00337 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A1O00337 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A1O00337 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A1O00337 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A1O00337 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SLC28A1O00337 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A1O00337 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
SLC28A1O00337 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SLC28A1O00337 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A1O00337 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A1O00337 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.4□□□□□ -0.1
SLC28A1O00337 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.4□□□□□ -0.1
SLC28A1O00337 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.4□□□□□ -0.1
SLC28A1O00337 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A1O00337 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A1O00337 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A1O00337 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A1O00337 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC28A1O00337 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC28A1O00337 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A1O00337 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A1O00337 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A1O00337 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SLC28A1O00337 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms