Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 ACTBP8-201ENST00000403258 1108 ntBASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 AC007551.1-201ENST00000457394 519 ntBASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 AC244669.2-201ENST00000612320 853 ntBASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 AL360270.3-201ENST00000609118 1348 ntBASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 KRT8P14-201ENST00000414254 1442 ntBASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPH3AQ9Y2J0 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 ZBED1P1-201ENST00000502364 1930 ntBASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 BNIP3P42-201ENST00000454982 569 ntBASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 BNIP3P29-201ENST00000598302 571 ntBASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 AC011447.5-201ENST00000616168 564 ntBASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 PRSS30P-206ENST00000641773 873 ntBASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RPH3AQ9Y2J0 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RPH3AQ9Y2J0 REXO1L2P-201ENST00000425429 2069 ntBASIC13.79□□□□□ -0.2
RPH3AQ9Y2J0 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RPH3AQ9Y2J0 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.79□□□□□ -0.2
RPH3AQ9Y2J0 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPH3AQ9Y2J0 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPH3AQ9Y2J0 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPH3AQ9Y2J0 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPH3AQ9Y2J0 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
RPH3AQ9Y2J0 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms