Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ERGIC3Q9Y282 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC13.71□□□□□ -0.21
ERGIC3Q9Y282 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ERGIC3Q9Y282 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ERGIC3Q9Y282 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ERGIC3Q9Y282 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.71□□□□□ -0.21
ERGIC3Q9Y282 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ERGIC3Q9Y282 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ERGIC3Q9Y282 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
ERGIC3Q9Y282 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC13.71□□□□□ -0.21
ERGIC3Q9Y282 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
ERGIC3Q9Y282 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
ERGIC3Q9Y282 AC104457.1-201ENST00000401024 814 ntBASIC13.71□□□□□ -0.21
ERGIC3Q9Y282 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
ERGIC3Q9Y282 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC13.71□□□□□ -0.21
ERGIC3Q9Y282 AC093909.1-201ENST00000504731 1122 ntBASIC13.71□□□□□ -0.21
ERGIC3Q9Y282 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ERGIC3Q9Y282 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.71□□□□□ -0.21
ERGIC3Q9Y282 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.71□□□□□ -0.21
ERGIC3Q9Y282 AC015910.1-201ENST00000579400 975 ntBASIC13.71□□□□□ -0.21
ERGIC3Q9Y282 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.71□□□□□ -0.21
ERGIC3Q9Y282 AC116407.3-201ENST00000623905 1129 ntBASIC13.71□□□□□ -0.21
ERGIC3Q9Y282 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.71□□□□□ -0.21
ERGIC3Q9Y282 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC13.71□□□□□ -0.21
ERGIC3Q9Y282 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.71□□□□□ -0.21
ERGIC3Q9Y282 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
ERGIC3Q9Y282 VPS51-217ENST00000639871 243 ntTSL 5 BASIC13.71□□□□□ -0.21
ERGIC3Q9Y282 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
ERGIC3Q9Y282 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ERGIC3Q9Y282 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
ERGIC3Q9Y282 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ERGIC3Q9Y282 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.71□□□□□ -0.21
ERGIC3Q9Y282 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ERGIC3Q9Y282 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
ERGIC3Q9Y282 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ERGIC3Q9Y282 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ERGIC3Q9Y282 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ERGIC3Q9Y282 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ERGIC3Q9Y282 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.71□□□□□ -0.22
ERGIC3Q9Y282 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
ERGIC3Q9Y282 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.71□□□□□ -0.22
ERGIC3Q9Y282 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
ERGIC3Q9Y282 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.71□□□□□ -0.22
ERGIC3Q9Y282 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ERGIC3Q9Y282 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
ERGIC3Q9Y282 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
ERGIC3Q9Y282 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
ERGIC3Q9Y282 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
ERGIC3Q9Y282 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ERGIC3Q9Y282 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.71□□□□□ -0.22
ERGIC3Q9Y282 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
ERGIC3Q9Y282 LILRP1-201ENST00000444199 1370 ntBASIC13.71□□□□□ -0.22
ERGIC3Q9Y282 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 TFAMP1-201ENST00000412727 736 ntBASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 AC022447.6-201ENST00000515522 438 ntBASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 FAM86C2P-203ENST00000528684 1004 ntBASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 MIR7706-201ENST00000613747 67 ntBASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.7□□□□□ -0.22
ERGIC3Q9Y282 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 292.7 ms