Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC17.85■□□□□ 0.45
ZC3H4Q9UPT8 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
ZC3H4Q9UPT8 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
ZC3H4Q9UPT8 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ZC3H4Q9UPT8 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.84■□□□□ 0.45
ZC3H4Q9UPT8 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZC3H4Q9UPT8 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
ZC3H4Q9UPT8 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZC3H4Q9UPT8 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
ZC3H4Q9UPT8 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZC3H4Q9UPT8 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ZC3H4Q9UPT8 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ZC3H4Q9UPT8 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZC3H4Q9UPT8 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZC3H4Q9UPT8 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
ZC3H4Q9UPT8 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC17.84■□□□□ 0.45
ZC3H4Q9UPT8 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC17.84■□□□□ 0.45
ZC3H4Q9UPT8 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZC3H4Q9UPT8 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC17.84■□□□□ 0.45
ZC3H4Q9UPT8 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ZC3H4Q9UPT8 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC17.84■□□□□ 0.45
ZC3H4Q9UPT8 AC007952.4-201ENST00000573866 637 ntBASIC17.84■□□□□ 0.45
ZC3H4Q9UPT8 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
ZC3H4Q9UPT8 THY1-209ENST00000580275 578 ntTSL 3 BASIC17.84■□□□□ 0.45
ZC3H4Q9UPT8 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ZC3H4Q9UPT8 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC17.84■□□□□ 0.45
ZC3H4Q9UPT8 AC012073.1-201ENST00000606114 1108 ntBASIC17.84■□□□□ 0.45
ZC3H4Q9UPT8 AC021016.3-201ENST00000608367 477 ntBASIC17.84■□□□□ 0.45
ZC3H4Q9UPT8 HMGB1P24-201ENST00000611897 328 ntBASIC17.84■□□□□ 0.45
ZC3H4Q9UPT8 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
ZC3H4Q9UPT8 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.84■□□□□ 0.45
ZC3H4Q9UPT8 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC17.84■□□□□ 0.45
ZC3H4Q9UPT8 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
ZC3H4Q9UPT8 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ZC3H4Q9UPT8 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.84■□□□□ 0.45
ZC3H4Q9UPT8 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
ZC3H4Q9UPT8 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ZC3H4Q9UPT8 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
ZC3H4Q9UPT8 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
ZC3H4Q9UPT8 TMBIM7P-202ENST00000641474 1516 ntBASIC17.84■□□□□ 0.45
ZC3H4Q9UPT8 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.84■□□□□ 0.45
ZC3H4Q9UPT8 AL157414.3-201ENST00000624276 1954 ntBASIC17.83■□□□□ 0.45
ZC3H4Q9UPT8 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
ZC3H4Q9UPT8 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
ZC3H4Q9UPT8 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
ZC3H4Q9UPT8 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ZC3H4Q9UPT8 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
ZC3H4Q9UPT8 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
ZC3H4Q9UPT8 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZC3H4Q9UPT8 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZC3H4Q9UPT8 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
ZC3H4Q9UPT8 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ZC3H4Q9UPT8 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ZC3H4Q9UPT8 DUX4L50-201ENST00000455245 715 ntBASIC17.83■□□□□ 0.44
ZC3H4Q9UPT8 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.83■□□□□ 0.44
ZC3H4Q9UPT8 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC17.83■□□□□ 0.44
ZC3H4Q9UPT8 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ZC3H4Q9UPT8 AL139339.2-201ENST00000608063 657 ntBASIC17.83■□□□□ 0.44
ZC3H4Q9UPT8 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC17.83■□□□□ 0.44
ZC3H4Q9UPT8 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZC3H4Q9UPT8 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZC3H4Q9UPT8 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZC3H4Q9UPT8 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.83■□□□□ 0.44
ZC3H4Q9UPT8 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZC3H4Q9UPT8 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ZC3H4Q9UPT8 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZC3H4Q9UPT8 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZC3H4Q9UPT8 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
ZC3H4Q9UPT8 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.83■□□□□ 0.44
ZC3H4Q9UPT8 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC17.83■□□□□ 0.44
ZC3H4Q9UPT8 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ZC3H4Q9UPT8 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.83■□□□□ 0.44
ZC3H4Q9UPT8 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ZC3H4Q9UPT8 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZC3H4Q9UPT8 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZC3H4Q9UPT8 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ZC3H4Q9UPT8 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZC3H4Q9UPT8 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZC3H4Q9UPT8 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZC3H4Q9UPT8 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.82■□□□□ 0.44
ZC3H4Q9UPT8 AL137783.1-201ENST00000623494 1896 ntBASIC17.82■□□□□ 0.44
ZC3H4Q9UPT8 MTHFR-217ENST00000641820 1569 ntBASIC17.82■□□□□ 0.44
ZC3H4Q9UPT8 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZC3H4Q9UPT8 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZC3H4Q9UPT8 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
ZC3H4Q9UPT8 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZC3H4Q9UPT8 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZC3H4Q9UPT8 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZC3H4Q9UPT8 SURF4-203ENST00000371991 715 ntTSL 3 BASIC17.82■□□□□ 0.44
ZC3H4Q9UPT8 NME4-203ENST00000397722 1232 ntTSL 2 BASIC17.82■□□□□ 0.44
ZC3H4Q9UPT8 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
ZC3H4Q9UPT8 PTPA-215ENST00000432124 567 ntTSL 4 BASIC17.82■□□□□ 0.44
ZC3H4Q9UPT8 AC083801.1-201ENST00000491689 358 ntBASIC17.82■□□□□ 0.44
ZC3H4Q9UPT8 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC17.82■□□□□ 0.44
ZC3H4Q9UPT8 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC17.82■□□□□ 0.44
ZC3H4Q9UPT8 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZC3H4Q9UPT8 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC17.82■□□□□ 0.44
ZC3H4Q9UPT8 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC17.82■□□□□ 0.44
ZC3H4Q9UPT8 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC17.82■□□□□ 0.44
ZC3H4Q9UPT8 AL022334.2-201ENST00000610000 484 ntBASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms