Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SCN11AQ9UI33 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC18.66■□□□□ 0.58
SCN11AQ9UI33 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SCN11AQ9UI33 AC114501.1-201ENST00000445949 172 ntBASIC18.66■□□□□ 0.58
SCN11AQ9UI33 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC18.66■□□□□ 0.58
SCN11AQ9UI33 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC18.66■□□□□ 0.58
SCN11AQ9UI33 AP000911.2-201ENST00000534330 502 ntBASIC18.66■□□□□ 0.58
SCN11AQ9UI33 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC18.66■□□□□ 0.58
SCN11AQ9UI33 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC18.66■□□□□ 0.58
SCN11AQ9UI33 SIGLEC22P-201ENST00000599104 714 ntBASIC18.66■□□□□ 0.58
SCN11AQ9UI33 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC18.66■□□□□ 0.58
SCN11AQ9UI33 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCN11AQ9UI33 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCN11AQ9UI33 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SCN11AQ9UI33 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCN11AQ9UI33 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCN11AQ9UI33 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC18.66■□□□□ 0.58
SCN11AQ9UI33 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCN11AQ9UI33 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCN11AQ9UI33 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC18.66■□□□□ 0.58
SCN11AQ9UI33 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCN11AQ9UI33 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC18.66■□□□□ 0.58
SCN11AQ9UI33 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SCN11AQ9UI33 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
SCN11AQ9UI33 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCN11AQ9UI33 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCN11AQ9UI33 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCN11AQ9UI33 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC18.65■□□□□ 0.58
SCN11AQ9UI33 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN11AQ9UI33 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC18.65■□□□□ 0.58
SCN11AQ9UI33 AL354861.1-201ENST00000445213 355 ntBASIC18.65■□□□□ 0.58
SCN11AQ9UI33 AC095040.1-201ENST00000513286 675 ntBASIC18.65■□□□□ 0.58
SCN11AQ9UI33 MAX-218ENST00000557746 571 ntTSL 4 BASIC18.65■□□□□ 0.58
SCN11AQ9UI33 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC18.65■□□□□ 0.58
SCN11AQ9UI33 MIR6074-201ENST00000612054 107 ntBASIC18.65■□□□□ 0.58
SCN11AQ9UI33 AL132780.4-201ENST00000624870 1135 ntBASIC18.65■□□□□ 0.58
SCN11AQ9UI33 AP001184.1-201ENST00000637936 376 ntBASIC18.65■□□□□ 0.58
SCN11AQ9UI33 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN11AQ9UI33 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN11AQ9UI33 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN11AQ9UI33 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.65■□□□□ 0.58
SCN11AQ9UI33 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SCN11AQ9UI33 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SCN11AQ9UI33 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN11AQ9UI33 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN11AQ9UI33 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN11AQ9UI33 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SCN11AQ9UI33 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN11AQ9UI33 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC18.65■□□□□ 0.58
SCN11AQ9UI33 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN11AQ9UI33 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC18.65■□□□□ 0.58
SCN11AQ9UI33 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC18.65■□□□□ 0.58
SCN11AQ9UI33 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC18.65■□□□□ 0.58
SCN11AQ9UI33 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SCN11AQ9UI33 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC18.65■□□□□ 0.58
SCN11AQ9UI33 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC18.65■□□□□ 0.58
SCN11AQ9UI33 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.65■□□□□ 0.58
SCN11AQ9UI33 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SCN11AQ9UI33 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
SCN11AQ9UI33 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC18.65■□□□□ 0.58
SCN11AQ9UI33 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SCN11AQ9UI33 AC104640.1-201ENST00000562617 2109 ntBASIC18.64■□□□□ 0.58
SCN11AQ9UI33 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.64■□□□□ 0.58
SCN11AQ9UI33 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SCN11AQ9UI33 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC18.64■□□□□ 0.58
SCN11AQ9UI33 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SCN11AQ9UI33 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC18.64■□□□□ 0.58
SCN11AQ9UI33 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCN11AQ9UI33 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SCN11AQ9UI33 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
SCN11AQ9UI33 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCN11AQ9UI33 CELP-201ENST00000411440 1249 ntTSL 5 BASIC18.64■□□□□ 0.57
SCN11AQ9UI33 AL592076.1-201ENST00000424448 303 ntBASIC18.64■□□□□ 0.57
SCN11AQ9UI33 AC097065.1-201ENST00000425737 517 ntBASIC18.64■□□□□ 0.57
SCN11AQ9UI33 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SCN11AQ9UI33 AC092638.2-201ENST00000441105 947 ntBASIC18.64■□□□□ 0.57
SCN11AQ9UI33 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC18.64■□□□□ 0.57
SCN11AQ9UI33 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC18.64■□□□□ 0.57
SCN11AQ9UI33 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC18.64■□□□□ 0.57
SCN11AQ9UI33 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC18.64■□□□□ 0.57
SCN11AQ9UI33 MIR6756-201ENST00000616240 63 ntBASIC18.64■□□□□ 0.57
SCN11AQ9UI33 HLA-C-210ENST00000640219 976 ntBASIC18.64■□□□□ 0.57
SCN11AQ9UI33 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCN11AQ9UI33 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SCN11AQ9UI33 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCN11AQ9UI33 AC215219.1-201ENST00000400706 1817 ntBASIC18.64■□□□□ 0.57
SCN11AQ9UI33 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SCN11AQ9UI33 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCN11AQ9UI33 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SCN11AQ9UI33 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.64■□□□□ 0.57
SCN11AQ9UI33 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC18.64■□□□□ 0.57
SCN11AQ9UI33 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCN11AQ9UI33 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCN11AQ9UI33 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCN11AQ9UI33 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SCN11AQ9UI33 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SCN11AQ9UI33 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.63■□□□□ 0.57
SCN11AQ9UI33 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCN11AQ9UI33 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SCN11AQ9UI33 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms