Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LRFN1Q9P244 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LRFN1Q9P244 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
LRFN1Q9P244 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRFN1Q9P244 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
LRFN1Q9P244 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.74□□□□□ -0.21
LRFN1Q9P244 INE2-201ENST00000630399 1874 ntBASIC13.74□□□□□ -0.21
LRFN1Q9P244 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.74□□□□□ -0.21
LRFN1Q9P244 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
LRFN1Q9P244 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRFN1Q9P244 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRFN1Q9P244 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.74□□□□□ -0.21
LRFN1Q9P244 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.73□□□□□ -0.21
LRFN1Q9P244 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.73□□□□□ -0.21
LRFN1Q9P244 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.73□□□□□ -0.21
LRFN1Q9P244 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRFN1Q9P244 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.73□□□□□ -0.21
LRFN1Q9P244 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.73□□□□□ -0.21
LRFN1Q9P244 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LRFN1Q9P244 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRFN1Q9P244 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.73□□□□□ -0.21
LRFN1Q9P244 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRFN1Q9P244 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRFN1Q9P244 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
LRFN1Q9P244 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
LRFN1Q9P244 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRFN1Q9P244 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
LRFN1Q9P244 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRFN1Q9P244 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRFN1Q9P244 AL354877.1-201ENST00000424412 413 ntBASIC13.73□□□□□ -0.21
LRFN1Q9P244 AC021723.1-201ENST00000486306 515 ntBASIC13.73□□□□□ -0.21
LRFN1Q9P244 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRFN1Q9P244 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRFN1Q9P244 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.73□□□□□ -0.21
LRFN1Q9P244 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.73□□□□□ -0.21
LRFN1Q9P244 AL136301.1-201ENST00000615830 422 ntBASIC13.73□□□□□ -0.21
LRFN1Q9P244 AL139099.5-201ENST00000635274 300 ntBASIC13.73□□□□□ -0.21
LRFN1Q9P244 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LRFN1Q9P244 AC020910.5-201ENST00000623668 1865 ntBASIC13.73□□□□□ -0.21
LRFN1Q9P244 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRFN1Q9P244 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRFN1Q9P244 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRFN1Q9P244 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRFN1Q9P244 AC018735.1-201ENST00000437208 1502 ntBASIC13.73□□□□□ -0.21
LRFN1Q9P244 AC011840.2-201ENST00000563063 1520 ntBASIC13.73□□□□□ -0.21
LRFN1Q9P244 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LRFN1Q9P244 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.73□□□□□ -0.21
LRFN1Q9P244 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRFN1Q9P244 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRFN1Q9P244 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRFN1Q9P244 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRFN1Q9P244 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
LRFN1Q9P244 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LRFN1Q9P244 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.73□□□□□ -0.21
LRFN1Q9P244 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.73□□□□□ -0.21
LRFN1Q9P244 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRFN1Q9P244 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRFN1Q9P244 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
LRFN1Q9P244 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRFN1Q9P244 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.72□□□□□ -0.21
LRFN1Q9P244 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.72□□□□□ -0.21
LRFN1Q9P244 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRFN1Q9P244 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRFN1Q9P244 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LRFN1Q9P244 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
LRFN1Q9P244 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.72□□□□□ -0.21
LRFN1Q9P244 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
LRFN1Q9P244 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRFN1Q9P244 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.72□□□□□ -0.21
LRFN1Q9P244 REXO1L2P-201ENST00000425429 2069 ntBASIC13.72□□□□□ -0.21
LRFN1Q9P244 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRFN1Q9P244 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13.72□□□□□ -0.21
LRFN1Q9P244 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRFN1Q9P244 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRFN1Q9P244 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.72□□□□□ -0.21
LRFN1Q9P244 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LRFN1Q9P244 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.72□□□□□ -0.21
LRFN1Q9P244 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRFN1Q9P244 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LRFN1Q9P244 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13.72□□□□□ -0.21
LRFN1Q9P244 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LRFN1Q9P244 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LRFN1Q9P244 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LRFN1Q9P244 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRFN1Q9P244 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.72□□□□□ -0.21
LRFN1Q9P244 AKR7A2P1-201ENST00000460134 915 ntBASIC13.72□□□□□ -0.21
LRFN1Q9P244 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC13.72□□□□□ -0.21
LRFN1Q9P244 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LRFN1Q9P244 KC6-205ENST00000599934 556 ntTSL 4 BASIC13.72□□□□□ -0.21
LRFN1Q9P244 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.72□□□□□ -0.21
LRFN1Q9P244 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRFN1Q9P244 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LRFN1Q9P244 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.72□□□□□ -0.21
LRFN1Q9P244 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.72□□□□□ -0.21
LRFN1Q9P244 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LRFN1Q9P244 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.72□□□□□ -0.21
LRFN1Q9P244 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.72□□□□□ -0.21
LRFN1Q9P244 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRFN1Q9P244 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRFN1Q9P244 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms