Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 TPM3P8-201ENST00000330554 643 ntBASIC14.19□□□□□ -0.14
KCMF1Q9P0J7 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KCMF1Q9P0J7 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.19□□□□□ -0.14
KCMF1Q9P0J7 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.19□□□□□ -0.14
KCMF1Q9P0J7 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.19□□□□□ -0.14
KCMF1Q9P0J7 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.19□□□□□ -0.14
KCMF1Q9P0J7 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
KCMF1Q9P0J7 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
KCMF1Q9P0J7 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KCMF1Q9P0J7 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.19□□□□□ -0.14
KCMF1Q9P0J7 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.19□□□□□ -0.14
KCMF1Q9P0J7 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.19□□□□□ -0.14
KCMF1Q9P0J7 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
KCMF1Q9P0J7 AC138466.3-201ENST00000619983 221 ntBASIC14.19□□□□□ -0.14
KCMF1Q9P0J7 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KCMF1Q9P0J7 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
KCMF1Q9P0J7 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.19□□□□□ -0.14
KCMF1Q9P0J7 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
KCMF1Q9P0J7 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KCMF1Q9P0J7 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.19□□□□□ -0.14
KCMF1Q9P0J7 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KCMF1Q9P0J7 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.19□□□□□ -0.14
KCMF1Q9P0J7 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KCMF1Q9P0J7 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KCMF1Q9P0J7 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
KCMF1Q9P0J7 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KCMF1Q9P0J7 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
KCMF1Q9P0J7 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
KCMF1Q9P0J7 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KCMF1Q9P0J7 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KCMF1Q9P0J7 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 AC106881.1-201ENST00000605849 3329 ntBASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 MIR1909-201ENST00000411312 80 ntBASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 CD8B2-202ENST00000417670 633 ntBASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 TLE1P1-201ENST00000422965 589 ntBASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 FAM197Y7-201ENST00000432892 766 ntBASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 AC022210.1-201ENST00000449856 793 ntBASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 AP000812.2-201ENST00000538934 718 ntBASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 KRT90P-201ENST00000549264 1064 ntBASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 ECM1P1-201ENST00000604092 1279 ntBASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 PDIA3P1-201ENST00000471856 1510 ntBASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
KCMF1Q9P0J7 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
KCMF1Q9P0J7 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KCMF1Q9P0J7 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
KCMF1Q9P0J7 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
KCMF1Q9P0J7 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KCMF1Q9P0J7 AL390755.1-201ENST00000623716 2027 ntBASIC14.17□□□□□ -0.14
KCMF1Q9P0J7 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KCMF1Q9P0J7 MTHFR-210ENST00000641407 2387 ntBASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms