Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC52A1Q9NWF4 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SLC52A1Q9NWF4 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC52A1Q9NWF4 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
SLC52A1Q9NWF4 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC52A1Q9NWF4 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC20.9■□□□□ 0.94
SLC52A1Q9NWF4 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC52A1Q9NWF4 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC20.9■□□□□ 0.94
SLC52A1Q9NWF4 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC52A1Q9NWF4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC52A1Q9NWF4 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC52A1Q9NWF4 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SLC52A1Q9NWF4 STK16-203ENST00000409516 895 ntTSL 2 BASIC20.9■□□□□ 0.94
SLC52A1Q9NWF4 IDS-203ENST00000428056 1213 ntTSL 2 BASIC20.9■□□□□ 0.94
SLC52A1Q9NWF4 AQP7P5-201ENST00000428759 1049 ntBASIC20.9■□□□□ 0.94
SLC52A1Q9NWF4 AC098934.1-203ENST00000442868 1262 ntBASIC20.9■□□□□ 0.94
SLC52A1Q9NWF4 AQP7P4-201ENST00000447083 1042 ntBASIC20.9■□□□□ 0.94
SLC52A1Q9NWF4 AQP7P2-201ENST00000453967 1041 ntBASIC20.9■□□□□ 0.94
SLC52A1Q9NWF4 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC20.9■□□□□ 0.94
SLC52A1Q9NWF4 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC52A1Q9NWF4 AC140658.4-201ENST00000561990 352 ntBASIC20.9■□□□□ 0.94
SLC52A1Q9NWF4 RN7SL357P-201ENST00000581065 298 ntBASIC20.9■□□□□ 0.94
SLC52A1Q9NWF4 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC20.9■□□□□ 0.94
SLC52A1Q9NWF4 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC52A1Q9NWF4 AQP7P3-201ENST00000624547 1041 ntBASIC20.9■□□□□ 0.94
SLC52A1Q9NWF4 AC002044.2-201ENST00000624910 970 ntBASIC20.9■□□□□ 0.94
SLC52A1Q9NWF4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC52A1Q9NWF4 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
SLC52A1Q9NWF4 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
SLC52A1Q9NWF4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
SLC52A1Q9NWF4 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC20.9■□□□□ 0.94
SLC52A1Q9NWF4 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC20.9■□□□□ 0.94
SLC52A1Q9NWF4 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC52A1Q9NWF4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC52A1Q9NWF4 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SLC52A1Q9NWF4 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC20.89■□□□□ 0.94
SLC52A1Q9NWF4 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC20.89■□□□□ 0.94
SLC52A1Q9NWF4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SLC52A1Q9NWF4 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SLC52A1Q9NWF4 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC20.89■□□□□ 0.94
SLC52A1Q9NWF4 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SLC52A1Q9NWF4 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SLC52A1Q9NWF4 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SLC52A1Q9NWF4 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC20.89■□□□□ 0.94
SLC52A1Q9NWF4 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC20.89■□□□□ 0.93
SLC52A1Q9NWF4 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC20.89■□□□□ 0.93
SLC52A1Q9NWF4 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC20.89■□□□□ 0.93
SLC52A1Q9NWF4 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC20.89■□□□□ 0.93
SLC52A1Q9NWF4 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SLC52A1Q9NWF4 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SLC52A1Q9NWF4 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC20.89■□□□□ 0.93
SLC52A1Q9NWF4 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC20.89■□□□□ 0.93
SLC52A1Q9NWF4 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC20.89■□□□□ 0.93
SLC52A1Q9NWF4 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC52A1Q9NWF4 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
SLC52A1Q9NWF4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
SLC52A1Q9NWF4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC52A1Q9NWF4 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SLC52A1Q9NWF4 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SLC52A1Q9NWF4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC52A1Q9NWF4 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SLC52A1Q9NWF4 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC20.89■□□□□ 0.93
SLC52A1Q9NWF4 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SLC52A1Q9NWF4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SLC52A1Q9NWF4 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC52A1Q9NWF4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SLC52A1Q9NWF4 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC52A1Q9NWF4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC52A1Q9NWF4 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC52A1Q9NWF4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC52A1Q9NWF4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC52A1Q9NWF4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC20.88■□□□□ 0.93
SLC52A1Q9NWF4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC20.88■□□□□ 0.93
SLC52A1Q9NWF4 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SLC52A1Q9NWF4 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC52A1Q9NWF4 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC52A1Q9NWF4 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SLC52A1Q9NWF4 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SLC52A1Q9NWF4 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC52A1Q9NWF4 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SLC52A1Q9NWF4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SLC52A1Q9NWF4 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC52A1Q9NWF4 NHP2-202ENST00000314397 599 ntTSL 2 BASIC20.88■□□□□ 0.93
SLC52A1Q9NWF4 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC52A1Q9NWF4 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SLC52A1Q9NWF4 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC52A1Q9NWF4 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC20.88■□□□□ 0.93
SLC52A1Q9NWF4 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC20.88■□□□□ 0.93
SLC52A1Q9NWF4 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC20.88■□□□□ 0.93
SLC52A1Q9NWF4 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC20.88■□□□□ 0.93
SLC52A1Q9NWF4 AC011247.3-201ENST00000603297 438 ntBASIC20.88■□□□□ 0.93
SLC52A1Q9NWF4 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SLC52A1Q9NWF4 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC20.88■□□□□ 0.93
SLC52A1Q9NWF4 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC52A1Q9NWF4 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SLC52A1Q9NWF4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC52A1Q9NWF4 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC52A1Q9NWF4 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SLC52A1Q9NWF4 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SLC52A1Q9NWF4 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms