Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC16.53■□□□□ 0.24
BLOC1S4Q9NUP1 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.53■□□□□ 0.24
BLOC1S4Q9NUP1 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
BLOC1S4Q9NUP1 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BLOC1S4Q9NUP1 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC16.53■□□□□ 0.24
BLOC1S4Q9NUP1 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
BLOC1S4Q9NUP1 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
BLOC1S4Q9NUP1 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
BLOC1S4Q9NUP1 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
BLOC1S4Q9NUP1 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC16.53■□□□□ 0.24
BLOC1S4Q9NUP1 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
BLOC1S4Q9NUP1 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
BLOC1S4Q9NUP1 AL136309.1-201ENST00000403917 691 ntBASIC16.53■□□□□ 0.24
BLOC1S4Q9NUP1 CNN2P10-201ENST00000443067 918 ntBASIC16.53■□□□□ 0.24
BLOC1S4Q9NUP1 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.53■□□□□ 0.24
BLOC1S4Q9NUP1 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.53■□□□□ 0.24
BLOC1S4Q9NUP1 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.53■□□□□ 0.24
BLOC1S4Q9NUP1 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.53■□□□□ 0.24
BLOC1S4Q9NUP1 HILS1-202ENST00000545329 423 ntBASIC16.53■□□□□ 0.24
BLOC1S4Q9NUP1 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
BLOC1S4Q9NUP1 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.53■□□□□ 0.24
BLOC1S4Q9NUP1 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.53■□□□□ 0.24
BLOC1S4Q9NUP1 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.53■□□□□ 0.24
BLOC1S4Q9NUP1 AC215219.1-201ENST00000400706 1817 ntBASIC16.53■□□□□ 0.24
BLOC1S4Q9NUP1 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
BLOC1S4Q9NUP1 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BLOC1S4Q9NUP1 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.53■□□□□ 0.24
BLOC1S4Q9NUP1 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.53■□□□□ 0.24
BLOC1S4Q9NUP1 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BLOC1S4Q9NUP1 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
BLOC1S4Q9NUP1 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
BLOC1S4Q9NUP1 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BLOC1S4Q9NUP1 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.53■□□□□ 0.24
BLOC1S4Q9NUP1 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
BLOC1S4Q9NUP1 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
BLOC1S4Q9NUP1 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
BLOC1S4Q9NUP1 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
BLOC1S4Q9NUP1 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
BLOC1S4Q9NUP1 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.52■□□□□ 0.24
BLOC1S4Q9NUP1 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
BLOC1S4Q9NUP1 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
BLOC1S4Q9NUP1 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
BLOC1S4Q9NUP1 AC027601.5-201ENST00000624065 2482 ntBASIC16.52■□□□□ 0.24
BLOC1S4Q9NUP1 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
BLOC1S4Q9NUP1 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC16.52■□□□□ 0.24
BLOC1S4Q9NUP1 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
BLOC1S4Q9NUP1 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
BLOC1S4Q9NUP1 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
BLOC1S4Q9NUP1 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
BLOC1S4Q9NUP1 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
BLOC1S4Q9NUP1 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.52■□□□□ 0.24
BLOC1S4Q9NUP1 AC234783.1-201ENST00000441761 496 ntBASIC16.52■□□□□ 0.24
BLOC1S4Q9NUP1 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.52■□□□□ 0.24
BLOC1S4Q9NUP1 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.52■□□□□ 0.24
BLOC1S4Q9NUP1 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.52■□□□□ 0.24
BLOC1S4Q9NUP1 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.52■□□□□ 0.24
BLOC1S4Q9NUP1 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.52■□□□□ 0.24
BLOC1S4Q9NUP1 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.52■□□□□ 0.24
BLOC1S4Q9NUP1 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
BLOC1S4Q9NUP1 AC008687.7-202ENST00000637404 953 ntBASIC16.52■□□□□ 0.24
BLOC1S4Q9NUP1 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.52■□□□□ 0.24
BLOC1S4Q9NUP1 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
BLOC1S4Q9NUP1 KRT8P4-201ENST00000509735 1454 ntBASIC16.52■□□□□ 0.23
BLOC1S4Q9NUP1 HSPA7-201ENST00000445535 1927 ntBASIC16.52■□□□□ 0.23
BLOC1S4Q9NUP1 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.52■□□□□ 0.23
BLOC1S4Q9NUP1 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
BLOC1S4Q9NUP1 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
BLOC1S4Q9NUP1 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
BLOC1S4Q9NUP1 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
BLOC1S4Q9NUP1 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
BLOC1S4Q9NUP1 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC16.52■□□□□ 0.23
BLOC1S4Q9NUP1 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
BLOC1S4Q9NUP1 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
BLOC1S4Q9NUP1 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.51■□□□□ 0.23
BLOC1S4Q9NUP1 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
BLOC1S4Q9NUP1 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BLOC1S4Q9NUP1 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BLOC1S4Q9NUP1 GSN-209ENST00000449733 2702 ntTSL 2 BASIC16.51■□□□□ 0.23
BLOC1S4Q9NUP1 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BLOC1S4Q9NUP1 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BLOC1S4Q9NUP1 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC16.51■□□□□ 0.23
BLOC1S4Q9NUP1 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BLOC1S4Q9NUP1 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.51■□□□□ 0.23
BLOC1S4Q9NUP1 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BLOC1S4Q9NUP1 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BLOC1S4Q9NUP1 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BLOC1S4Q9NUP1 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
BLOC1S4Q9NUP1 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BLOC1S4Q9NUP1 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.51■□□□□ 0.23
BLOC1S4Q9NUP1 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.51■□□□□ 0.23
BLOC1S4Q9NUP1 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.51■□□□□ 0.23
BLOC1S4Q9NUP1 PPY2P-201ENST00000582808 702 ntBASIC16.51■□□□□ 0.23
BLOC1S4Q9NUP1 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BLOC1S4Q9NUP1 MIR4259-201ENST00000584466 101 ntBASIC16.51■□□□□ 0.23
BLOC1S4Q9NUP1 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.51■□□□□ 0.23
BLOC1S4Q9NUP1 ZACNP1-201ENST00000612259 710 ntBASIC16.51■□□□□ 0.23
BLOC1S4Q9NUP1 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.51■□□□□ 0.23
BLOC1S4Q9NUP1 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BLOC1S4Q9NUP1 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
BLOC1S4Q9NUP1 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms